Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gm22271-201ENSMUST00000104035 128 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm25631-201ENSMUST00000104390 130 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm13929-201ENSMUST00000117553 1125 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm11850-201ENSMUST00000119679 479 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm5883-201ENSMUST00000120735 495 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm15061-201ENSMUST00000121076 1046 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 BC002163-201ENSMUST00000121906 319 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm12152-201ENSMUST00000122465 684 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm8046-201ENSMUST00000172151 616 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Mir6912-201ENSMUST00000184456 70 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm29214-201ENSMUST00000190216 570 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm38384-201ENSMUST00000195413 1122 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm44285-201ENSMUST00000203557 940 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm44705-201ENSMUST00000206719 339 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm34424-201ENSMUST00000213400 782 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm33312-201ENSMUST00000222443 332 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 AC165260.4-201ENSMUST00000225924 724 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm38377-201ENSMUST00000193253 3772 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CtifQ6PEE2 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 AC164297.2-201ENSMUST00000224388 1508 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.31□□□□□ -1.24
CtifQ6PEE2 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 AC160029.1-201ENSMUST00000219628 2678 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Mir760-201ENSMUST00000103257 119 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gm24334-201ENSMUST00000104210 128 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gm11901-201ENSMUST00000120412 437 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gm15079-201ENSMUST00000121943 216 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gm6081-201ENSMUST00000134472 489 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Traj54-201ENSMUST00000165071 54 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gm26570-201ENSMUST00000180672 342 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gm2287-201ENSMUST00000197417 1084 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 AV026068-219ENSMUST00000224148 933 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 CT009556.4-201ENSMUST00000227092 200 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 AC157572.1-201ENSMUST00000227187 825 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 AC137950.1-201ENSMUST00000228553 515 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gm42998-201ENSMUST00000197053 2371 ntBASIC7.3□□□□□ -1.24
CtifQ6PEE2 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC7.3□□□□□ -1.24
CtifQ6PEE2 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 129.3 ms