Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdh11P55288 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdh11P55288 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Gm15074-201ENSMUST00000117603 936 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Gm7571-201ENSMUST00000120252 927 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Gm11689-201ENSMUST00000120766 302 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdh11P55288 Gm2709-201ENSMUST00000142979 350 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdh11P55288 Gm23018-201ENSMUST00000177928 109 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Gm21839-201ENSMUST00000179536 378 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Gm5272-201ENSMUST00000182730 982 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Mir6987-201ENSMUST00000184789 73 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Gm43147-201ENSMUST00000196944 542 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdh11P55288 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdh11P55288 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.24□□□□□ -1.41
Cdh11P55288 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.24□□□□□ -1.41
Cdh11P55288 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdh11P55288 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.24□□□□□ -1.41
Cdh11P55288 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Olfr683-201ENSMUST00000061284 960 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Cdh11P55288 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.24□□□□□ -1.41
Cdh11P55288 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
Cdh11P55288 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Cdh11P55288 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdh11P55288 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
Cdh11P55288 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Cdh11P55288 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cdh11P55288 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Cdh11P55288 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.24□□□□□ -1.41
Cdh11P55288 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh11P55288 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
Cdh11P55288 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cdh11P55288 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdh11P55288 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm23437-201ENSMUST00000104036 127 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Gm5319-201ENSMUST00000118965 873 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Gm11320-201ENSMUST00000119434 463 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Gm8421-201ENSMUST00000119439 305 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Gm12104-201ENSMUST00000120359 979 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Gm12321-201ENSMUST00000121485 804 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC6.23□□□□□ -1.41
Cdh11P55288 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm16357-201ENSMUST00000144091 474 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.23□□□□□ -1.41
Cdh11P55288 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm8357-201ENSMUST00000181115 1011 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Gm17786-201ENSMUST00000182000 427 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Mir8120-201ENSMUST00000185035 139 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm28580-201ENSMUST00000186767 88 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Gm28443-201ENSMUST00000189081 698 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Gm38373-201ENSMUST00000192042 288 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm43906-201ENSMUST00000203194 906 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm9315-201ENSMUST00000222696 908 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdh11P55288 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.23□□□□□ -1.41
Cdh11P55288 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdh11P55288 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdh11P55288 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms