Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VhlP40338 Gm23484-201ENSMUST00000104178 131 ntBASIC5.57□□□□□ -1.52
VhlP40338 Gm14248-201ENSMUST00000117790 544 ntBASIC5.57□□□□□ -1.52
VhlP40338 Gm13196-201ENSMUST00000118297 379 ntBASIC5.57□□□□□ -1.52
VhlP40338 Gm13163-201ENSMUST00000119875 336 ntBASIC5.57□□□□□ -1.52
VhlP40338 Gm13525-201ENSMUST00000120607 478 ntBASIC5.57□□□□□ -1.52
VhlP40338 Gm12321-201ENSMUST00000121485 804 ntBASIC5.57□□□□□ -1.52
VhlP40338 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.57□□□□□ -1.52
VhlP40338 Gm24893-201ENSMUST00000122745 369 ntBASIC5.57□□□□□ -1.52
VhlP40338 Gm7991-201ENSMUST00000168668 591 ntBASIC5.57□□□□□ -1.52
VhlP40338 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Gm6536-201ENSMUST00000171180 615 ntBASIC5.57□□□□□ -1.52
VhlP40338 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.57□□□□□ -1.52
VhlP40338 Gm20813-201ENSMUST00000186646 705 ntBASIC5.57□□□□□ -1.52
VhlP40338 Gm21923-201ENSMUST00000188455 696 ntBASIC5.57□□□□□ -1.52
VhlP40338 Gm18430-201ENSMUST00000197534 682 ntBASIC5.57□□□□□ -1.52
VhlP40338 Gm17833-201ENSMUST00000197629 1065 ntBASIC5.57□□□□□ -1.52
VhlP40338 Gm18484-201ENSMUST00000204389 991 ntBASIC5.57□□□□□ -1.52
VhlP40338 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VhlP40338 Gm17950-201ENSMUST00000214617 646 ntBASIC5.57□□□□□ -1.52
VhlP40338 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC5.57□□□□□ -1.52
VhlP40338 CT025639.2-201ENSMUST00000224440 1220 ntBASIC5.57□□□□□ -1.52
VhlP40338 Zfp874a-208ENSMUST00000225479 1092 ntBASIC5.57□□□□□ -1.52
VhlP40338 AC125087.1-201ENSMUST00000227552 514 ntBASIC5.57□□□□□ -1.52
VhlP40338 AC131029.2-203ENSMUST00000228116 1244 ntBASIC5.57□□□□□ -1.52
VhlP40338 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VhlP40338 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VhlP40338 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.57□□□□□ -1.52
VhlP40338 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.57□□□□□ -1.52
VhlP40338 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Gm16123-201ENSMUST00000118647 1517 ntBASIC5.57□□□□□ -1.52
VhlP40338 AC153143.2-201ENSMUST00000220999 1804 ntBASIC5.57□□□□□ -1.52
VhlP40338 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.57□□□□□ -1.52
VhlP40338 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.57□□□□□ -1.52
VhlP40338 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.57□□□□□ -1.52
VhlP40338 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VhlP40338 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VhlP40338 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 AC117608.1-201ENSMUST00000225500 3418 ntBASIC5.56□□□□□ -1.52
VhlP40338 Gm9877-201ENSMUST00000064271 2627 ntBASIC5.56□□□□□ -1.52
VhlP40338 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC5.56□□□□□ -1.52
VhlP40338 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VhlP40338 Gm17170-201ENSMUST00000112785 316 ntBASIC5.56□□□□□ -1.52
VhlP40338 Gm16044-201ENSMUST00000118475 450 ntBASIC5.56□□□□□ -1.52
VhlP40338 Gm12879-201ENSMUST00000120003 1182 ntBASIC5.56□□□□□ -1.52
VhlP40338 Gm15160-201ENSMUST00000120553 907 ntBASIC5.56□□□□□ -1.52
VhlP40338 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC5.56□□□□□ -1.52
VhlP40338 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC5.56□□□□□ -1.52
VhlP40338 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC5.56□□□□□ -1.52
VhlP40338 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Gm9167-201ENSMUST00000182469 962 ntBASIC5.56□□□□□ -1.52
VhlP40338 Gm5181-201ENSMUST00000183140 971 ntBASIC5.56□□□□□ -1.52
VhlP40338 Gm18254-201ENSMUST00000185699 1204 ntBASIC5.56□□□□□ -1.52
VhlP40338 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC5.56□□□□□ -1.52
VhlP40338 Gm28801-201ENSMUST00000188761 449 ntBASIC5.56□□□□□ -1.52
VhlP40338 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VhlP40338 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Gm37017-201ENSMUST00000195266 747 ntBASIC5.56□□□□□ -1.52
VhlP40338 Gm42938-201ENSMUST00000198414 1072 ntBASIC5.56□□□□□ -1.52
VhlP40338 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Gm45514-201ENSMUST00000211531 689 ntBASIC5.56□□□□□ -1.52
VhlP40338 Gm6885-201ENSMUST00000217261 372 ntBASIC5.56□□□□□ -1.52
VhlP40338 Gm35638-201ENSMUST00000220724 652 ntBASIC5.56□□□□□ -1.52
VhlP40338 AC159205.1-201ENSMUST00000225513 1099 ntBASIC5.56□□□□□ -1.52
VhlP40338 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Gm28392-201ENSMUST00000077630 393 ntBASIC5.56□□□□□ -1.52
VhlP40338 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC5.56□□□□□ -1.52
VhlP40338 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
VhlP40338 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 Gm37863-201ENSMUST00000194911 1457 ntBASIC5.56□□□□□ -1.52
VhlP40338 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VhlP40338 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms