Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.7□□□□□ -1.18
Col2a1P28481 Gm22342-201ENSMUST00000122647 298 ntBASIC7.7□□□□□ -1.18
Col2a1P28481 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.7□□□□□ -1.18
Col2a1P28481 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 Gm23674-201ENSMUST00000157473 131 ntBASIC7.7□□□□□ -1.18
Col2a1P28481 Gm25374-201ENSMUST00000158158 101 ntBASIC7.7□□□□□ -1.18
Col2a1P28481 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col2a1P28481 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.7□□□□□ -1.18
Col2a1P28481 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 Gm9517-201ENSMUST00000195021 874 ntBASIC7.7□□□□□ -1.18
Col2a1P28481 Gm44361-201ENSMUST00000197960 94 ntBASIC7.7□□□□□ -1.18
Col2a1P28481 Gm9710-201ENSMUST00000198053 499 ntBASIC7.7□□□□□ -1.18
Col2a1P28481 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 AC157085.1-201ENSMUST00000216343 162 ntBASIC7.7□□□□□ -1.18
Col2a1P28481 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col2a1P28481 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.7□□□□□ -1.18
Col2a1P28481 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Col2a1P28481 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Col2a1P28481 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Gm42930-201ENSMUST00000200872 3260 ntBASIC7.7□□□□□ -1.18
Col2a1P28481 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.7□□□□□ -1.18
Col2a1P28481 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 Gm37772-201ENSMUST00000191635 1394 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC7.69□□□□□ -1.18
Col2a1P28481 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Gm26037-201ENSMUST00000158150 311 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Gm23259-201ENSMUST00000158318 303 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.69□□□□□ -1.18
Col2a1P28481 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.69□□□□□ -1.18
Col2a1P28481 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC7.69□□□□□ -1.18
Col2a1P28481 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Gm27348-201ENSMUST00000184511 170 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.69□□□□□ -1.18
Col2a1P28481 Gm38237-201ENSMUST00000193366 376 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Gm37177-201ENSMUST00000193768 417 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Gm5694-201ENSMUST00000195648 641 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC7.69□□□□□ -1.18
Col2a1P28481 Gm44571-201ENSMUST00000208092 533 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Gm17997-201ENSMUST00000211801 840 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 AC153557.1-201ENSMUST00000217697 403 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Gm5080-201ENSMUST00000220341 743 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 AC131029.2-201ENSMUST00000226696 628 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Col2a1P28481 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Col2a1P28481 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col2a1P28481 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Gm42866-201ENSMUST00000195919 3304 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Col2a1P28481 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.69□□□□□ -1.18
Col2a1P28481 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
Col2a1P28481 Gm19210-201ENSMUST00000199562 1350 ntBASIC7.69□□□□□ -1.18
Col2a1P28481 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC7.69□□□□□ -1.18
Col2a1P28481 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Col2a1P28481 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms