Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdx1P18111 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC5.62□□□□□ -1.51
Cdx1P18111 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Cdx1P18111 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
Cdx1P18111 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Gm42613-201ENSMUST00000199975 1931 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdx1P18111 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Cdx1P18111 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdx1P18111 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Cdx1P18111 Gm11926-201ENSMUST00000118520 430 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Gm15153-201ENSMUST00000119867 274 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC5.62□□□□□ -1.51
Cdx1P18111 Gm9697-201ENSMUST00000147052 997 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Gm23740-201ENSMUST00000157385 100 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Gm22687-201ENSMUST00000158301 105 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Gm10012-202ENSMUST00000170379 372 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Gm9286-201ENSMUST00000173586 508 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Gm27782-201ENSMUST00000185059 199 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Gm5147-201ENSMUST00000185999 794 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.62□□□□□ -1.51
Cdx1P18111 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdx1P18111 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC5.62□□□□□ -1.51
Cdx1P18111 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC5.62□□□□□ -1.51
Cdx1P18111 Gm44892-201ENSMUST00000208595 488 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 AC164550.1-201ENSMUST00000217821 1066 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Gm19056-201ENSMUST00000218220 797 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Cdx1P18111 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cdx1P18111 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cdx1P18111 Gm24696-201ENSMUST00000083878 134 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.62□□□□□ -1.51
Cdx1P18111 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Cdx1P18111 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Gm2654-201ENSMUST00000221381 1592 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.62□□□□□ -1.51
Cdx1P18111 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cdx1P18111 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.62□□□□□ -1.51
Cdx1P18111 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdx1P18111 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cdx1P18111 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdx1P18111 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm14201-201ENSMUST00000117627 289 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Gm13983-201ENSMUST00000118018 865 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm6877-201ENSMUST00000119347 1101 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Cdx1P18111 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC5.61□□□□□ -1.51
Cdx1P18111 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm18254-201ENSMUST00000185699 1204 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Gm21181-201ENSMUST00000186249 330 ntBASIC5.61□□□□□ -1.51
Cdx1P18111 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC5.61□□□□□ -1.51
Cdx1P18111 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC5.61□□□□□ -1.51
Cdx1P18111 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdx1P18111 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC5.61□□□□□ -1.51
Cdx1P18111 Gm29214-201ENSMUST00000190216 570 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms