Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
NpcdF8VQB8 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
NpcdF8VQB8 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 CT009757.4-201ENSMUST00000221520 2541 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
NpcdF8VQB8 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
NpcdF8VQB8 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 AC159301.1-202ENSMUST00000225860 2133 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
NpcdF8VQB8 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC8.81□□□□□ -1
NpcdF8VQB8 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC8.81□□□□□ -1
NpcdF8VQB8 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
NpcdF8VQB8 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm14943-201ENSMUST00000118056 546 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Gm13532-201ENSMUST00000120373 240 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm15164-201ENSMUST00000122203 271 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC8.81□□□□□ -1
NpcdF8VQB8 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm25505-201ENSMUST00000157220 246 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Gm26183-201ENSMUST00000157685 139 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Gm24435-201ENSMUST00000157886 110 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Gm24343-201ENSMUST00000158708 111 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Mir3473c-201ENSMUST00000175262 81 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Mir378d-201ENSMUST00000184232 110 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Gm7266-201ENSMUST00000187999 405 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Gm28801-201ENSMUST00000188761 449 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Gm28996-201ENSMUST00000190316 721 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm30517-201ENSMUST00000197350 772 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm45693-201ENSMUST00000211391 1157 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 AC154642.1-201ENSMUST00000224173 740 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm22971-201ENSMUST00000083305 97 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm43343-201ENSMUST00000202454 1926 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 CT010577.1-202ENSMUST00000226187 1903 ntBASIC8.81□□□□□ -1
NpcdF8VQB8 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC8.81□□□□□ -1
NpcdF8VQB8 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.8□□□□□ -1
NpcdF8VQB8 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NpcdF8VQB8 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC8.8□□□□□ -1
NpcdF8VQB8 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
NpcdF8VQB8 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NpcdF8VQB8 Gm6786-201ENSMUST00000203165 1915 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
NpcdF8VQB8 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
NpcdF8VQB8 AC061963.2-201ENSMUST00000213541 2739 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC8.8□□□□□ -1
NpcdF8VQB8 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
NpcdF8VQB8 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC8.8□□□□□ -1
NpcdF8VQB8 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC8.8□□□□□ -1
NpcdF8VQB8 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.8□□□□□ -1
NpcdF8VQB8 Gm14891-201ENSMUST00000117378 596 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Gm15048-201ENSMUST00000118201 954 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Gm13224-201ENSMUST00000119586 94 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Gm12402-201ENSMUST00000120536 334 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Gm16057-201ENSMUST00000120811 759 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Gm12778-201ENSMUST00000122341 333 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC8.8□□□□□ -1
NpcdF8VQB8 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC8.8□□□□□ -1
NpcdF8VQB8 Gm24545-201ENSMUST00000158651 85 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC8.8□□□□□ -1
NpcdF8VQB8 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC8.8□□□□□ -1
NpcdF8VQB8 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC8.8□□□□□ -1
NpcdF8VQB8 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC8.8□□□□□ -1
NpcdF8VQB8 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms