Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Snord88a-201ENSMUST00000116723 90 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm14158-201ENSMUST00000118409 308 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm12447-201ENSMUST00000119110 470 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm22523-201ENSMUST00000158696 100 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm23164-201ENSMUST00000175084 111 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm9556-201ENSMUST00000182938 940 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Mir6908-201ENSMUST00000184056 63 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm21728-201ENSMUST00000188442 695 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm21889-201ENSMUST00000188487 695 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm20932-201ENSMUST00000189115 694 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm21920-201ENSMUST00000190042 695 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm22711-202ENSMUST00000197029 135 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm34144-201ENSMUST00000197039 259 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm23054-201ENSMUST00000082804 162 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Upk3aQ9JKX8 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm14550-201ENSMUST00000117918 407 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm13444-201ENSMUST00000119445 522 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm15311-201ENSMUST00000119682 282 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm15305-201ENSMUST00000120354 288 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm14353-201ENSMUST00000122200 869 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm20615-201ENSMUST00000177503 705 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm37493-201ENSMUST00000193167 433 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm36965-201ENSMUST00000193797 394 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm35619-201ENSMUST00000222548 600 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm9985-201ENSMUST00000044101 510 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Mir484-201ENSMUST00000093566 67 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Upk3aQ9JKX8 Gm42636-201ENSMUST00000197174 2239 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Upk3aQ9JKX8 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms