Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm27178-201ENSMUST00000184962 340 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm38840-201ENSMUST00000204716 843 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gpr87-201ENSMUST00000056898 1080 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.41□□□□□ -1.38
Cdc40Q9DC48 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Gm26480-201ENSMUST00000122619 297 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Gm2619-202ENSMUST00000166777 651 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Gm4956-202ENSMUST00000178869 672 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 AC161374.1-201ENSMUST00000224191 794 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Gm5528-201ENSMUST00000076314 480 ntBASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Cdc40Q9DC48 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.4□□□□□ -1.39
Cdc40Q9DC48 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
Cdc40Q9DC48 Gm22774-201ENSMUST00000102084 109 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms