Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm44289-201ENSMUST00000204144 1390 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm22707-201ENSMUST00000103834 110 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm12944-201ENSMUST00000119262 463 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm8312-201ENSMUST00000119380 618 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm11198-201ENSMUST00000119771 974 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm3208-201ENSMUST00000168281 427 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Mir6241-201ENSMUST00000184225 103 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm9114-201ENSMUST00000188558 997 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm8101-201ENSMUST00000192796 478 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm42782-201ENSMUST00000197286 522 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 CT025630.2-201ENSMUST00000228293 487 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm14245-201ENSMUST00000118939 1843 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Smc1aQ9CU62 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Smc1aQ9CU62 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.17
Smc1aQ9CU62 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Smc1aQ9CU62 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Smc1aQ9CU62 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Smc1aQ9CU62 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.17
Smc1aQ9CU62 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Gm25311-201ENSMUST00000104136 132 ntBASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Gm5752-201ENSMUST00000117771 594 ntBASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Gm11320-201ENSMUST00000119434 463 ntBASIC7.71□□□□□ -1.18
Smc1aQ9CU62 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Mir1907-201ENSMUST00000122509 90 ntBASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Gm3585-201ENSMUST00000173438 875 ntBASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Gm5261-201ENSMUST00000185860 713 ntBASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Gm18907-201ENSMUST00000209719 932 ntBASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7.71□□□□□ -1.18
Smc1aQ9CU62 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Gm14849-201ENSMUST00000122293 2846 ntBASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Gm37033-201ENSMUST00000193199 7350 ntBASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Smc1aQ9CU62 AC124581.3-201ENSMUST00000224270 1624 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Dcdc5-202ENSMUST00000122388 4957 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 AC163660.4-201ENSMUST00000224983 2171 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms