Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.42□□□□□ -1.38
Use1Q9CQ56 Mir7084-201ENSMUST00000183876 70 ntBASIC6.42□□□□□ -1.38
Use1Q9CQ56 Gm20813-201ENSMUST00000186646 705 ntBASIC6.42□□□□□ -1.38
Use1Q9CQ56 Gm21923-201ENSMUST00000188455 696 ntBASIC6.42□□□□□ -1.38
Use1Q9CQ56 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Gm44213-201ENSMUST00000204977 703 ntBASIC6.42□□□□□ -1.38
Use1Q9CQ56 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.42□□□□□ -1.38
Use1Q9CQ56 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.42□□□□□ -1.38
Use1Q9CQ56 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Gm17611-202ENSMUST00000220613 814 ntBASIC6.42□□□□□ -1.38
Use1Q9CQ56 Gm46424-201ENSMUST00000221567 168 ntBASIC6.42□□□□□ -1.38
Use1Q9CQ56 Diaph3-204ENSMUST00000226254 682 ntBASIC6.42□□□□□ -1.38
Use1Q9CQ56 AC121542.2-201ENSMUST00000227529 400 ntBASIC6.42□□□□□ -1.38
Use1Q9CQ56 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.42□□□□□ -1.38
Use1Q9CQ56 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Use1Q9CQ56 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.42□□□□□ -1.38
Use1Q9CQ56 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Use1Q9CQ56 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm4911-201ENSMUST00000119388 945 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm12297-201ENSMUST00000121380 979 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm26480-201ENSMUST00000122619 297 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 BC064078-201ENSMUST00000122939 570 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm7707-201ENSMUST00000165950 1156 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm20430-201ENSMUST00000172474 207 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm24923-201ENSMUST00000178201 88 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Mir8120-201ENSMUST00000185035 139 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm30517-201ENSMUST00000197350 772 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm44253-201ENSMUST00000203387 628 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm44931-201ENSMUST00000206056 545 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm4270-201ENSMUST00000209666 406 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm10126-201ENSMUST00000221732 168 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.41□□□□□ -1.38
Use1Q9CQ56 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Use1Q9CQ56 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.4□□□□□ -1.38
Use1Q9CQ56 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Use1Q9CQ56 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.4□□□□□ -1.38
Use1Q9CQ56 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
Use1Q9CQ56 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Use1Q9CQ56 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Use1Q9CQ56 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Use1Q9CQ56 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms