Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.1□□□□□ -1.43
Scrt1Q99M85 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scrt1Q99M85 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.1□□□□□ -1.43
Scrt1Q99M85 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Scrt1Q99M85 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Scrt1Q99M85 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scrt1Q99M85 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scrt1Q99M85 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scrt1Q99M85 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.1□□□□□ -1.43
Scrt1Q99M85 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scrt1Q99M85 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scrt1Q99M85 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm7189-201ENSMUST00000119811 429 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm11257-201ENSMUST00000121313 315 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm25782-201ENSMUST00000122526 289 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 Mir5110-201ENSMUST00000175537 87 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm20702-201ENSMUST00000176181 460 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm37669-201ENSMUST00000192184 820 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Mir106b-201ENSMUST00000083580 82 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scrt1Q99M85 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scrt1Q99M85 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.09□□□□□ -1.43
Scrt1Q99M85 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
Scrt1Q99M85 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.44
Scrt1Q99M85 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Scrt1Q99M85 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Scrt1Q99M85 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.44
Scrt1Q99M85 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Scrt1Q99M85 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Scrt1Q99M85 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.09□□□□□ -1.44
Scrt1Q99M85 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Scrt1Q99M85 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.09□□□□□ -1.44
Scrt1Q99M85 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.09□□□□□ -1.44
Scrt1Q99M85 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Scrt1Q99M85 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.09□□□□□ -1.44
Scrt1Q99M85 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.08□□□□□ -1.44
Scrt1Q99M85 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.08□□□□□ -1.44
Scrt1Q99M85 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scrt1Q99M85 CT025619.3-201ENSMUST00000216299 3267 ntBASIC6.08□□□□□ -1.44
Scrt1Q99M85 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Gm22267-201ENSMUST00000104008 131 ntBASIC6.08□□□□□ -1.44
Scrt1Q99M85 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Gm11920-201ENSMUST00000118491 563 ntBASIC6.08□□□□□ -1.44
Scrt1Q99M85 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Scrt1Q99M85 Gm5272-201ENSMUST00000182730 982 ntBASIC6.08□□□□□ -1.44
Scrt1Q99M85 Mir6403-201ENSMUST00000185007 129 ntBASIC6.08□□□□□ -1.44
Scrt1Q99M85 Gm28739-201ENSMUST00000185415 696 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms