Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm43775-201ENSMUST00000201019 3395 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm26417-201ENSMUST00000104274 135 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm26416-201ENSMUST00000104280 134 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm25498-201ENSMUST00000104424 129 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm13260-201ENSMUST00000117797 1264 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm13221-201ENSMUST00000121712 430 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Esd-ps-201ENSMUST00000170684 847 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.17□□□□□ -1.26
Usp11Q99K46 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm45725-201ENSMUST00000212962 337 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm10126-201ENSMUST00000221732 168 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Vmn1r41-202ENSMUST00000226337 888 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm22053-201ENSMUST00000083394 200 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm44289-201ENSMUST00000204144 1390 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
Usp11Q99K46 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.16□□□□□ -1.26
Usp11Q99K46 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Usp11Q99K46 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm25396-201ENSMUST00000103981 133 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm12181-201ENSMUST00000121448 531 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm16330-201ENSMUST00000128324 297 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm24228-201ENSMUST00000158829 129 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm16107-201ENSMUST00000162523 862 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm17212-201ENSMUST00000166666 259 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp11Q99K46 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.16□□□□□ -1.26
Usp11Q99K46 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm45276-201ENSMUST00000209549 1086 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.16□□□□□ -1.26
Usp11Q99K46 AC114573.1-201ENSMUST00000224120 1210 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 AC131117.2-202ENSMUST00000224539 547 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 CT009711.4-201ENSMUST00000225685 198 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp11Q99K46 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm23734-201ENSMUST00000083753 109 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm11342-203ENSMUST00000224879 1324 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Usp11Q99K46 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Usp11Q99K46 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm18701-201ENSMUST00000188281 1536 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Usp11Q99K46 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.16□□□□□ -1.26
Usp11Q99K46 Gm37142-201ENSMUST00000193718 3110 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms