Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 AC171003.1-201ENSMUST00000221667 1665 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm43537-201ENSMUST00000199064 3110 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm15422-201ENSMUST00000117453 541 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm14380-201ENSMUST00000122298 431 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm8869-201ENSMUST00000195222 947 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm20223-201ENSMUST00000199932 805 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm46203-201ENSMUST00000218130 478 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 Gm43621-201ENSMUST00000202733 2022 ntBASIC6.18□□□□□ -1.42
Col6a6Q8C6K9 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm22426-201ENSMUST00000103811 96 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm13114-201ENSMUST00000117605 106 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm11984-201ENSMUST00000118142 766 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm22701-201ENSMUST00000175371 291 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm29201-201ENSMUST00000189120 431 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm6693-201ENSMUST00000189583 813 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm43850-201ENSMUST00000202021 578 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 AC122034.1-201ENSMUST00000227641 595 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 AC154616.2-201ENSMUST00000227978 398 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm20302-201ENSMUST00000080671 275 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm24451-201ENSMUST00000083353 133 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm37906-201ENSMUST00000192050 3035 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm37745-201ENSMUST00000193304 8163 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Col6a6Q8C6K9 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm11533-201ENSMUST00000120287 477 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm26346-201ENSMUST00000157525 329 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm25387-201ENSMUST00000157813 132 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm25717-201ENSMUST00000158631 353 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm38237-201ENSMUST00000193366 376 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Gm45514-201ENSMUST00000211531 689 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.16□□□□□ -1.42
Col6a6Q8C6K9 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms