Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Gm43383-201ENSMUST00000195981 469 ntBASIC9.59□□□□□ -0.87
Usp47Q8BY87 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC9.59□□□□□ -0.87
Usp47Q8BY87 Gm7769-201ENSMUST00000212900 933 ntBASIC9.59□□□□□ -0.87
Usp47Q8BY87 AC159267.1-201ENSMUST00000226702 678 ntBASIC9.59□□□□□ -0.87
Usp47Q8BY87 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Mir138-1-201ENSMUST00000083480 99 ntBASIC9.59□□□□□ -0.87
Usp47Q8BY87 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm14373-201ENSMUST00000122467 2158 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm37534-201ENSMUST00000194483 5222 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm10855-201ENSMUST00000100426 2541 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 AC154461.6-201ENSMUST00000224815 2630 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm23768-201ENSMUST00000104440 131 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm23426-201ENSMUST00000122483 318 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm24812-201ENSMUST00000175315 284 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm28023-201ENSMUST00000184556 60 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm27825-201ENSMUST00000184586 60 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm7463-201ENSMUST00000201541 547 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm7986-201ENSMUST00000221336 551 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Usp47Q8BY87 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Usp47Q8BY87 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC9.58□□□□□ -0.88
Usp47Q8BY87 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp47Q8BY87 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 AU020206-202ENSMUST00000206358 3009 ntBASIC9.57□□□□□ -0.88
Usp47Q8BY87 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm14116-201ENSMUST00000117733 805 ntBASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm6654-201ENSMUST00000118950 348 ntBASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm22223-201ENSMUST00000157360 125 ntBASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm9064-201ENSMUST00000163579 566 ntBASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm6061-201ENSMUST00000175860 492 ntBASIC9.57□□□□□ -0.88
Usp47Q8BY87 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm2229-201ENSMUST00000193328 710 ntBASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm1969-201ENSMUST00000198125 1220 ntBASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Olfr923-204ENSMUST00000219798 1068 ntBASIC9.57□□□□□ -0.88
Usp47Q8BY87 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 AL671874.1-201ENSMUST00000223746 1123 ntBASIC9.57□□□□□ -0.88
Usp47Q8BY87 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Usp47Q8BY87 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC9.57□□□□□ -0.88
Usp47Q8BY87 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Usp47Q8BY87 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Usp47Q8BY87 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 116.8 ms