Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm27601-201ENSMUST00000184794 127 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm28996-201ENSMUST00000190316 721 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm9710-201ENSMUST00000198053 499 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 AC154431.2-201ENSMUST00000225215 1055 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm6436-201ENSMUST00000077163 451 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm6990-201ENSMUST00000086830 348 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm43618-201ENSMUST00000197392 3451 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Grik1-210ENSMUST00000228034 2708 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm9529-201ENSMUST00000177598 579 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Mir7082-201ENSMUST00000183526 92 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm37901-201ENSMUST00000195107 514 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm43392-201ENSMUST00000196560 434 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm44162-201ENSMUST00000203543 544 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm8667-201ENSMUST00000211112 449 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Gm18789-201ENSMUST00000216115 550 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 AC073562.1-201ENSMUST00000222117 401 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Nup98Q6PFD9 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gm14550-201ENSMUST00000117918 407 ntBASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gm24687-201ENSMUST00000157758 241 ntBASIC7.93□□□□□ -1.14
Nup98Q6PFD9 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gm18833-201ENSMUST00000173218 862 ntBASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gm20530-201ENSMUST00000174261 254 ntBASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gm22655-201ENSMUST00000174949 96 ntBASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gm20691-201ENSMUST00000176889 333 ntBASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Mir6367-201ENSMUST00000183385 102 ntBASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gm5260-201ENSMUST00000186157 949 ntBASIC7.93□□□□□ -1.14
Nup98Q6PFD9 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gm9240-201ENSMUST00000206527 742 ntBASIC7.93□□□□□ -1.14
Nup98Q6PFD9 AC157085.1-201ENSMUST00000216343 162 ntBASIC7.93□□□□□ -1.14
Nup98Q6PFD9 AC151904.3-201ENSMUST00000219266 895 ntBASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC7.93□□□□□ -1.14
Nup98Q6PFD9 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms