Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm43557-201ENSMUST00000197100 2370 ntBASIC8.14□□□□□ -1.11
Vps54Q5SPW0 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps54Q5SPW0 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps54Q5SPW0 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps54Q5SPW0 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps54Q5SPW0 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps54Q5SPW0 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps54Q5SPW0 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Vps54Q5SPW0 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.14□□□□□ -1.11
Vps54Q5SPW0 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps54Q5SPW0 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Vps54Q5SPW0 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps54Q5SPW0 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm31049-201ENSMUST00000201516 1302 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 AC139750.1-201ENSMUST00000223962 1300 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm23748-201ENSMUST00000104227 131 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm25877-201ENSMUST00000104326 129 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm12375-201ENSMUST00000119331 921 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm20615-201ENSMUST00000177503 705 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm7270-201ENSMUST00000195818 1128 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm9504-201ENSMUST00000196322 468 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm36448-201ENSMUST00000199916 438 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm44279-201ENSMUST00000205154 472 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm2767-201ENSMUST00000209582 473 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 AL929555.1-201ENSMUST00000215283 509 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm35619-201ENSMUST00000222548 600 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 CT009711.2-201ENSMUST00000225352 934 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 AC114008.1-201ENSMUST00000226193 937 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Glycam1-204ENSMUST00000228895 641 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm7731-201ENSMUST00000091759 470 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm13416-201ENSMUST00000117264 1612 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm43128-201ENSMUST00000202212 1621 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm42597-201ENSMUST00000196663 1544 ntBASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Vps54Q5SPW0 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 AC122828.2-201ENSMUST00000222511 2880 ntBASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm3555-201ENSMUST00000160287 1395 ntBASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm5319-201ENSMUST00000118965 873 ntBASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm12540-201ENSMUST00000121938 319 ntBASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm25989-201ENSMUST00000158761 133 ntBASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Mir7212-201ENSMUST00000184098 61 ntBASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm28428-201ENSMUST00000188886 697 ntBASIC8.12□□□□□ -1.11
Vps54Q5SPW0 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Ighv8-3-201ENSMUST00000194985 295 ntBASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Vps54Q5SPW0 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm14896-201ENSMUST00000121311 1351 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 AC153152.1-201ENSMUST00000221105 2742 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Gm44661-201ENSMUST00000208830 3503 ntBASIC8.11□□□□□ -1.11
Vps54Q5SPW0 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms