Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm24719-201ENSMUST00000157520 110 ntBASIC8.4□□□□□ -1.07
Shank3Q4ACU6 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC8.4□□□□□ -1.07
Shank3Q4ACU6 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.4□□□□□ -1.07
Shank3Q4ACU6 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC8.4□□□□□ -1.07
Shank3Q4ACU6 Gm4332-201ENSMUST00000196114 346 ntBASIC8.4□□□□□ -1.07
Shank3Q4ACU6 Gm42886-201ENSMUST00000199214 466 ntBASIC8.4□□□□□ -1.07
Shank3Q4ACU6 Gm43794-201ENSMUST00000200971 692 ntBASIC8.4□□□□□ -1.07
Shank3Q4ACU6 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC8.4□□□□□ -1.07
Shank3Q4ACU6 Gm4510-201ENSMUST00000218265 427 ntBASIC8.4□□□□□ -1.07
Shank3Q4ACU6 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.4□□□□□ -1.07
Shank3Q4ACU6 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Shank3Q4ACU6 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Shank3Q4ACU6 Gm16415-201ENSMUST00000080097 489 ntBASIC8.4□□□□□ -1.07
Shank3Q4ACU6 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
Shank3Q4ACU6 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Shank3Q4ACU6 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
Shank3Q4ACU6 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Shank3Q4ACU6 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm14938-201ENSMUST00000119482 943 ntBASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm18752-201ENSMUST00000192876 608 ntBASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm8929-201ENSMUST00000197781 1132 ntBASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm7802-201ENSMUST00000216464 262 ntBASIC8.39□□□□□ -1.07
Shank3Q4ACU6 AC153800.1-201ENSMUST00000219212 365 ntBASIC8.39□□□□□ -1.07
Shank3Q4ACU6 AC211878.6-201ENSMUST00000221896 358 ntBASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm10826-201ENSMUST00000215366 3304 ntBASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC8.39□□□□□ -1.07
Shank3Q4ACU6 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Gm28653-201ENSMUST00000185494 5276 ntBASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Gm23440-201ENSMUST00000104299 130 ntBASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Gm11624-201ENSMUST00000118579 1041 ntBASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Gm29197-201ENSMUST00000185922 702 ntBASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Gm37265-201ENSMUST00000191698 885 ntBASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 AC154657.1-201ENSMUST00000226394 775 ntBASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Snora44-201ENSMUST00000082670 129 ntBASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Gm7676-201ENSMUST00000084055 319 ntBASIC8.38□□□□□ -1.07
Shank3Q4ACU6 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.38□□□□□ -1.07
Shank3Q4ACU6 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms