Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm13739-201ENSMUST00000118020 530 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm11865-201ENSMUST00000118093 859 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm6542-201ENSMUST00000153606 772 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm23740-201ENSMUST00000157385 100 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm17973-201ENSMUST00000174509 520 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm20637-201ENSMUST00000175715 462 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm21839-201ENSMUST00000179536 378 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm43596-201ENSMUST00000202818 884 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm43905-201ENSMUST00000204516 204 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm2398-201ENSMUST00000218347 883 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 AC158392.1-201ENSMUST00000223720 1069 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm13768-201ENSMUST00000116469 929 ntBASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm15203-201ENSMUST00000117668 455 ntBASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm5759-201ENSMUST00000119203 811 ntBASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm14840-201ENSMUST00000122135 594 ntBASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm22275-201ENSMUST00000122470 310 ntBASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Mir6409-201ENSMUST00000184957 92 ntBASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm36935-201ENSMUST00000192526 292 ntBASIC6.86□□□□□ -1.31
Usp39Q3TIX9 Gm37328-201ENSMUST00000193191 640 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms