Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 AC159195.2-201ENSMUST00000223670 3757 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm6866-201ENSMUST00000188559 2549 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6□□□□□ -1.45
Nkx3-1P97436 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm44441-201ENSMUST00000203642 2475 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6□□□□□ -1.45
Nkx3-1P97436 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm25724-201ENSMUST00000104531 117 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Gm11553-201ENSMUST00000120682 240 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Gm11472-201ENSMUST00000121305 556 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6□□□□□ -1.45
Nkx3-1P97436 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm4956-202ENSMUST00000178869 672 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Gm21614-201ENSMUST00000183260 1005 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC6□□□□□ -1.45
Nkx3-1P97436 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm17895-201ENSMUST00000194028 874 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Gm43555-201ENSMUST00000196588 310 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Gm5711-201ENSMUST00000197896 421 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm9367-201ENSMUST00000205703 546 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Gm45394-201ENSMUST00000209240 1175 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm45782-201ENSMUST00000212670 366 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 AC122533.1-201ENSMUST00000225177 767 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 AC164436.1-201ENSMUST00000227074 772 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6□□□□□ -1.45
Nkx3-1P97436 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Mir425-201ENSMUST00000083645 85 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Gm22865-201ENSMUST00000083949 214 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6□□□□□ -1.45
Nkx3-1P97436 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6□□□□□ -1.45
Nkx3-1P97436 AC183268.1-201ENSMUST00000215753 2837 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Nkx3-1P97436 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm43961-201ENSMUST00000203289 1872 ntBASIC6□□□□□ -1.45
Nkx3-1P97436 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Nkx3-1P97436 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6□□□□□ -1.45
Nkx3-1P97436 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Nkx3-1P97436 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
Nkx3-1P97436 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms