Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nkx2-3P97334 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Nkx2-3P97334 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nkx2-3P97334 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nkx2-3P97334 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nkx2-3P97334 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC9.42□□□□□ -0.9
Nkx2-3P97334 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nkx2-3P97334 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Nkx2-3P97334 CT010505.3-201ENSMUST00000227835 1651 ntBASIC9.42□□□□□ -0.9
Nkx2-3P97334 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nkx2-3P97334 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nkx2-3P97334 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nkx2-3P97334 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC9.42□□□□□ -0.9
Nkx2-3P97334 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Esrrg-201ENSMUST00000027906 5293 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm20236-201ENSMUST00000193037 4540 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm37094-201ENSMUST00000193352 4540 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm7821-201ENSMUST00000117111 788 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm11905-201ENSMUST00000117653 678 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm16053-201ENSMUST00000120511 188 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm14122-201ENSMUST00000122076 973 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm25780-201ENSMUST00000122528 253 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm22895-201ENSMUST00000157508 308 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm24824-201ENSMUST00000175097 78 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Mir6357-201ENSMUST00000184246 104 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 AC151967.1-201ENSMUST00000198146 76 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm42723-201ENSMUST00000199966 1044 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm19170-201ENSMUST00000212440 1084 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 AC155270.1-201ENSMUST00000221626 4028 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Gm44763-201ENSMUST00000208287 2019 ntBASIC9.41□□□□□ -0.9
Nkx2-3P97334 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nkx2-3P97334 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm38300-201ENSMUST00000194245 1870 ntBASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm9585-201ENSMUST00000219681 1404 ntBASIC9.4□□□□□ -0.9
Nkx2-3P97334 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm18451-201ENSMUST00000196759 1719 ntBASIC9.4□□□□□ -0.9
Nkx2-3P97334 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Nedd4l-204ENSMUST00000224347 3150 ntBASIC9.4□□□□□ -0.9
Nkx2-3P97334 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm18726-201ENSMUST00000218175 2010 ntBASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm12468-201ENSMUST00000116189 404 ntBASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm15209-201ENSMUST00000117703 400 ntBASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm12944-201ENSMUST00000119262 463 ntBASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC9.4□□□□□ -0.9
Nkx2-3P97334 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm27014-201ENSMUST00000182658 937 ntBASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm7412-201ENSMUST00000191692 605 ntBASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm8101-201ENSMUST00000192796 478 ntBASIC9.4□□□□□ -0.9
Nkx2-3P97334 Gm20128-201ENSMUST00000196189 417 ntBASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms