Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CiitaP79621 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CiitaP79621 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CiitaP79621 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CiitaP79621 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.49□□□□□ -1.21
CiitaP79621 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CiitaP79621 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CiitaP79621 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CiitaP79621 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CiitaP79621 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CiitaP79621 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.49□□□□□ -1.21
CiitaP79621 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CiitaP79621 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.49□□□□□ -1.21
CiitaP79621 Gm14863-201ENSMUST00000119648 307 ntBASIC7.49□□□□□ -1.21
CiitaP79621 Gm13462-201ENSMUST00000121472 961 ntBASIC7.49□□□□□ -1.21
CiitaP79621 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.49□□□□□ -1.21
CiitaP79621 Gm37689-201ENSMUST00000193139 275 ntBASIC7.49□□□□□ -1.21
CiitaP79621 Gm43689-201ENSMUST00000195951 427 ntBASIC7.49□□□□□ -1.21
CiitaP79621 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CiitaP79621 Gm43089-201ENSMUST00000199162 275 ntBASIC7.49□□□□□ -1.21
CiitaP79621 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CiitaP79621 AC069561.1-201ENSMUST00000213750 424 ntBASIC7.49□□□□□ -1.21
CiitaP79621 Gm5119-201ENSMUST00000215858 634 ntBASIC7.49□□□□□ -1.21
CiitaP79621 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC7.49□□□□□ -1.21
CiitaP79621 Gm7252-201ENSMUST00000223284 456 ntBASIC7.49□□□□□ -1.21
CiitaP79621 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CiitaP79621 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
CiitaP79621 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.49□□□□□ -1.21
CiitaP79621 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CiitaP79621 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
CiitaP79621 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CiitaP79621 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
CiitaP79621 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CiitaP79621 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.49□□□□□ -1.21
CiitaP79621 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CiitaP79621 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.48□□□□□ -1.21
CiitaP79621 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CiitaP79621 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CiitaP79621 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CiitaP79621 Gm42630-201ENSMUST00000195908 3448 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CiitaP79621 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CiitaP79621 Gm22231-201ENSMUST00000101027 73 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CiitaP79621 Gm24473-201ENSMUST00000104483 131 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.48□□□□□ -1.21
CiitaP79621 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CiitaP79621 Gm15311-201ENSMUST00000119682 282 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Gm15305-201ENSMUST00000120354 288 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Gm14489-201ENSMUST00000120868 901 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CiitaP79621 Gm7613-201ENSMUST00000139070 487 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CiitaP79621 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CiitaP79621 Gm22642-201ENSMUST00000175352 252 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
CiitaP79621 Gm8192-201ENSMUST00000182196 958 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Gm37383-201ENSMUST00000191750 745 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Gm7019-201ENSMUST00000194122 369 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.48□□□□□ -1.21
CiitaP79621 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC7.48□□□□□ -1.21
CiitaP79621 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Gm45739-201ENSMUST00000213094 388 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CiitaP79621 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC7.48□□□□□ -1.21
CiitaP79621 AC163621.1-201ENSMUST00000220695 379 ntBASIC7.48□□□□□ -1.21
CiitaP79621 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.48□□□□□ -1.21
CiitaP79621 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.48□□□□□ -1.21
CiitaP79621 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CiitaP79621 Gm10108-201ENSMUST00000078246 319 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Gm26130-201ENSMUST00000083171 138 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CiitaP79621 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CiitaP79621 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CiitaP79621 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CiitaP79621 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CiitaP79621 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
CiitaP79621 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7.48□□□□□ -1.21
CiitaP79621 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CiitaP79621 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.47□□□□□ -1.21
CiitaP79621 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CiitaP79621 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CiitaP79621 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CiitaP79621 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CiitaP79621 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.47□□□□□ -1.21
CiitaP79621 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CiitaP79621 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.47□□□□□ -1.21
CiitaP79621 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CiitaP79621 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CiitaP79621 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.47□□□□□ -1.21
CiitaP79621 Gm9285-201ENSMUST00000177691 697 ntBASIC7.47□□□□□ -1.21
CiitaP79621 Gm21392-201ENSMUST00000182950 972 ntBASIC7.47□□□□□ -1.21
CiitaP79621 Gm28975-201ENSMUST00000186412 686 ntBASIC7.47□□□□□ -1.21
CiitaP79621 Gm38177-201ENSMUST00000192213 1040 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms