Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rpl39P62892 AC122769.1-201ENSMUST00000226930 1714 ntBASIC4.71□□□□□ -1.66
Rpl39P62892 Gm37531-201ENSMUST00000191628 5415 ntBASIC4.71□□□□□ -1.66
Rpl39P62892 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rpl39P62892 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Rpl39P62892 Gm10650-202ENSMUST00000196581 1969 ntBASIC4.71□□□□□ -1.66
Rpl39P62892 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Rpl39P62892 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
Rpl39P62892 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rpl39P62892 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC4.71□□□□□ -1.66
Rpl39P62892 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Rpl39P62892 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Rpl39P62892 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rpl39P62892 Robo2-210ENSMUST00000226478 8059 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Rpl39P62892 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rpl39P62892 AC187103.1-201ENSMUST00000224641 1475 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rpl39P62892 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Rpl39P62892 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm18632-201ENSMUST00000222597 2087 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rpl39P62892 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rpl39P62892 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rpl39P62892 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm6743-201ENSMUST00000117345 1066 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm13414-201ENSMUST00000117516 727 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm11558-201ENSMUST00000118454 459 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm14466-201ENSMUST00000119028 451 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm5387-201ENSMUST00000119776 857 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm12297-201ENSMUST00000121380 979 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm12321-201ENSMUST00000121485 804 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
Rpl39P62892 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm23392-201ENSMUST00000157580 113 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm26486-201ENSMUST00000158021 110 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm23220-201ENSMUST00000158115 137 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm6726-201ENSMUST00000172786 681 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC4.7□□□□□ -1.66
Rpl39P62892 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm5181-201ENSMUST00000183140 971 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm29470-201ENSMUST00000188007 696 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm29072-201ENSMUST00000191149 678 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm38305-201ENSMUST00000194825 223 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC4.7□□□□□ -1.66
Rpl39P62892 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rpl39P62892 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm45122-201ENSMUST00000206376 784 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm7419-201ENSMUST00000209962 925 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Gm2774-201ENSMUST00000213650 1165 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Olfr809-203ENSMUST00000218237 1100 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC4.7□□□□□ -1.66
Rpl39P62892 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rpl39P62892 AC102689.1-201ENSMUST00000220511 1090 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 AC163684.1-201ENSMUST00000223766 927 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Zfp874a-208ENSMUST00000225479 1092 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 CT025667.1-201ENSMUST00000225872 382 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 AC159267.1-201ENSMUST00000226702 678 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 AC121542.2-201ENSMUST00000227529 400 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rpl39P62892 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rpl39P62892 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Rpl39P62892 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Rpl39P62892 AC161247.1-201ENSMUST00000217744 2295 ntBASIC4.7□□□□□ -1.66
Rpl39P62892 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Rpl39P62892 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rpl39P62892 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC4.7□□□□□ -1.66
Rpl39P62892 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rpl39P62892 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rpl39P62892 AC165260.6-206ENSMUST00000223884 3698 ntBASIC4.69□□□□□ -1.66
Rpl39P62892 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Rpl39P62892 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Rpl39P62892 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rpl39P62892 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Rpl39P62892 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Rpl39P62892 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Rpl39P62892 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC4.69□□□□□ -1.66
Rpl39P62892 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rpl39P62892 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rpl39P62892 Gm37106-201ENSMUST00000193760 1532 ntBASIC4.69□□□□□ -1.66
Rpl39P62892 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rpl39P62892 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms