Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Gm8107-201ENSMUST00000117477 2009 ntBASIC7.39□□□□□ -1.23
NcanP55066 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC7.39□□□□□ -1.23
NcanP55066 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Gm25346-201ENSMUST00000104509 128 ntBASIC7.39□□□□□ -1.23
NcanP55066 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Gm26162-201ENSMUST00000157793 132 ntBASIC7.39□□□□□ -1.23
NcanP55066 Gm5456-201ENSMUST00000170706 844 ntBASIC7.39□□□□□ -1.23
NcanP55066 Gm25675-201ENSMUST00000174979 118 ntBASIC7.39□□□□□ -1.23
NcanP55066 Gm17045-201ENSMUST00000178600 844 ntBASIC7.39□□□□□ -1.23
NcanP55066 Gm7745-201ENSMUST00000182235 973 ntBASIC7.39□□□□□ -1.23
NcanP55066 Gm9320-201ENSMUST00000184151 473 ntBASIC7.39□□□□□ -1.23
NcanP55066 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC7.39□□□□□ -1.23
NcanP55066 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Gm29470-201ENSMUST00000188007 696 ntBASIC7.39□□□□□ -1.23
NcanP55066 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC7.39□□□□□ -1.23
NcanP55066 Gm37203-201ENSMUST00000191618 385 ntBASIC7.39□□□□□ -1.23
NcanP55066 Gm37196-201ENSMUST00000194762 906 ntBASIC7.39□□□□□ -1.23
NcanP55066 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC7.39□□□□□ -1.23
NcanP55066 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
NcanP55066 Gm43725-201ENSMUST00000200122 369 ntBASIC7.39□□□□□ -1.23
NcanP55066 AC140409.4-201ENSMUST00000215757 538 ntBASIC7.39□□□□□ -1.23
NcanP55066 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NcanP55066 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.39□□□□□ -1.23
NcanP55066 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NcanP55066 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.39□□□□□ -1.23
NcanP55066 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.39□□□□□ -1.23
NcanP55066 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Gm42972-201ENSMUST00000196937 5617 ntBASIC7.39□□□□□ -1.23
NcanP55066 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 AC132474.1-201ENSMUST00000214407 3686 ntBASIC7.39□□□□□ -1.23
NcanP55066 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
NcanP55066 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
NcanP55066 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
NcanP55066 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
NcanP55066 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
NcanP55066 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.38□□□□□ -1.23
NcanP55066 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
NcanP55066 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
NcanP55066 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
NcanP55066 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.38□□□□□ -1.23
NcanP55066 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.38□□□□□ -1.23
NcanP55066 Gm23426-201ENSMUST00000122483 318 ntBASIC7.38□□□□□ -1.23
NcanP55066 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC7.38□□□□□ -1.23
NcanP55066 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC7.38□□□□□ -1.23
NcanP55066 Gm25550-201ENSMUST00000158079 128 ntBASIC7.38□□□□□ -1.23
NcanP55066 Mir3078-201ENSMUST00000175231 87 ntBASIC7.38□□□□□ -1.23
NcanP55066 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.38□□□□□ -1.23
NcanP55066 Gm26509-201ENSMUST00000180947 948 ntBASIC7.38□□□□□ -1.23
NcanP55066 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.38□□□□□ -1.23
NcanP55066 Mir6963-201ENSMUST00000183535 71 ntBASIC7.38□□□□□ -1.23
NcanP55066 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC7.38□□□□□ -1.23
NcanP55066 Gm44943-201ENSMUST00000207254 300 ntBASIC7.38□□□□□ -1.23
NcanP55066 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.38□□□□□ -1.23
NcanP55066 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.38□□□□□ -1.23
NcanP55066 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.38□□□□□ -1.23
NcanP55066 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.38□□□□□ -1.23
NcanP55066 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.38□□□□□ -1.23
NcanP55066 AC173482.3-201ENSMUST00000225492 1212 ntBASIC7.38□□□□□ -1.23
NcanP55066 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.38□□□□□ -1.23
NcanP55066 AC131178.1-201ENSMUST00000228649 492 ntBASIC7.38□□□□□ -1.23
NcanP55066 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
NcanP55066 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
NcanP55066 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC7.38□□□□□ -1.23
NcanP55066 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
NcanP55066 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
NcanP55066 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms