Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm6436-201ENSMUST00000077163 451 ntBASIC8.73□□□□□ -1.01
Msh6P54276 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Msh6P54276 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Msh6P54276 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC8.73□□□□□ -1.01
Msh6P54276 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC8.73□□□□□ -1.01
Msh6P54276 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Gm23748-201ENSMUST00000104227 131 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Gm13983-201ENSMUST00000118018 865 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Gm11879-201ENSMUST00000121885 702 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Msh6P54276 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Gm23276-201ENSMUST00000157913 138 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Gm25717-201ENSMUST00000158631 353 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Gm20432-201ENSMUST00000173716 250 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC8.73□□□□□ -1.01
Msh6P54276 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC8.73□□□□□ -1.01
Msh6P54276 Gm27653-201ENSMUST00000185037 136 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Scgb2b33-201ENSMUST00000187413 334 ntBASIC8.73□□□□□ -1.01
Msh6P54276 Gm5694-201ENSMUST00000195648 641 ntBASIC8.73□□□□□ -1.01
Msh6P54276 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC8.73□□□□□ -1.01
Msh6P54276 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC8.73□□□□□ -1.01
Msh6P54276 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Msh6P54276 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.72□□□□□ -1.01
Msh6P54276 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Msh6P54276 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Msh6P54276 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.72□□□□□ -1.01
Msh6P54276 AC129308.2-203ENSMUST00000224109 2385 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.72□□□□□ -1.01
Msh6P54276 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Msh6P54276 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Msh6P54276 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Msh6P54276 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.72□□□□□ -1.01
Msh6P54276 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.72□□□□□ -1.01
Msh6P54276 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Msh6P54276 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
Msh6P54276 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Msh6P54276 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Msh6P54276 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Msh6P54276 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Msh6P54276 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Msh6P54276 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Msh6P54276 Gm13642-201ENSMUST00000121697 381 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC8.72□□□□□ -1.01
Msh6P54276 Gm24687-201ENSMUST00000157758 241 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Gm26169-201ENSMUST00000158420 135 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Gm24343-201ENSMUST00000158708 111 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Gm28527-201ENSMUST00000185210 297 ntBASIC8.72□□□□□ -1.01
Msh6P54276 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Msh6P54276 Gm35323-201ENSMUST00000191836 499 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Gm42443-201ENSMUST00000198084 1155 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Gm30708-201ENSMUST00000202183 312 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC8.72□□□□□ -1.01
Msh6P54276 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC8.72□□□□□ -1.01
Msh6P54276 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.72□□□□□ -1.01
Msh6P54276 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.72□□□□□ -1.01
Msh6P54276 Olfr809-203ENSMUST00000218237 1100 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC8.72□□□□□ -1.01
Msh6P54276 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC8.72□□□□□ -1.01
Msh6P54276 AC132833.4-201ENSMUST00000228313 203 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Msh6P54276 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.72□□□□□ -1.01
Msh6P54276 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Msh6P54276 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Msh6P54276 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Msh6P54276 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Msh6P54276 Gm43029-201ENSMUST00000201829 1535 ntBASIC8.71□□□□□ -1.01
Msh6P54276 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Msh6P54276 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.01
Msh6P54276 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Msh6P54276 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Msh6P54276 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Msh6P54276 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Msh6P54276 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.71□□□□□ -1.01
Msh6P54276 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Msh6P54276 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Msh6P54276 Gm43789-201ENSMUST00000199275 2472 ntBASIC8.71□□□□□ -1.02
Msh6P54276 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Msh6P54276 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Msh6P54276 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Msh6P54276 Gm13462-201ENSMUST00000121472 961 ntBASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms