Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Sox1P53783 Gm4849-201ENSMUST00000188428 2246 ntBASIC7.75□□□□□ -1.17
Sox1P53783 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Sox1P53783 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Sox1P53783 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Sox1P53783 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Sox1P53783 Ptchd1-201ENSMUST00000038665 2768 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Sox1P53783 Gucy1b3-204ENSMUST00000193597 3171 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Sox1P53783 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Sox1P53783 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Sox1P53783 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Sox1P53783 Gm13108-201ENSMUST00000122287 1455 ntBASIC7.75□□□□□ -1.17
Sox1P53783 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC7.75□□□□□ -1.17
Sox1P53783 Aoc1-203ENSMUST00000162948 2831 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Gm5120-201ENSMUST00000215231 2414 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm38043-201ENSMUST00000195501 5141 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Gpr85-203ENSMUST00000115492 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC7.74□□□□□ -1.17
Sox1P53783 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Sox1P53783 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 AC156025.2-201ENSMUST00000225907 1533 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Gm42648-201ENSMUST00000200774 2505 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
Sox1P53783 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Sox1P53783 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Sox1P53783 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm26416-201ENSMUST00000104280 134 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm13195-201ENSMUST00000117229 261 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm11406-201ENSMUST00000117418 484 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm14727-201ENSMUST00000118526 525 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm11407-201ENSMUST00000120362 1058 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm13489-201ENSMUST00000121234 971 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm14721-201ENSMUST00000121381 525 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm15644-201ENSMUST00000121764 387 ntBASIC7.74□□□□□ -1.17
Sox1P53783 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm8614-201ENSMUST00000182528 978 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Rps12l1-201ENSMUST00000183090 399 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.74□□□□□ -1.17
Sox1P53783 Gm3496-201ENSMUST00000188283 745 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC7.74□□□□□ -1.17
Sox1P53783 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.74□□□□□ -1.17
Sox1P53783 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.74□□□□□ -1.17
Sox1P53783 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC7.74□□□□□ -1.17
Sox1P53783 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC7.74□□□□□ -1.17
Sox1P53783 AL603630.1-201ENSMUST00000214781 147 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Sox1P53783 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC7.74□□□□□ -1.17
Sox1P53783 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Gm19047-201ENSMUST00000220922 1099 ntBASIC7.74□□□□□ -1.17
Sox1P53783 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC7.74□□□□□ -1.17
Sox1P53783 AC158523.2-201ENSMUST00000222708 548 ntBASIC7.74□□□□□ -1.17
Sox1P53783 AC158525.1-201ENSMUST00000223806 576 ntBASIC7.74□□□□□ -1.17
Sox1P53783 AC113031.2-201ENSMUST00000226132 579 ntBASIC7.74□□□□□ -1.17
Sox1P53783 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.74□□□□□ -1.17
Sox1P53783 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Sox1P53783 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Sox1P53783 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Sox1P53783 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Sox1P53783 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC7.74□□□□□ -1.17
Sox1P53783 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Sox1P53783 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.74□□□□□ -1.17
Sox1P53783 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Sox1P53783 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Sox1P53783 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC7.74□□□□□ -1.17
Sox1P53783 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC7.74□□□□□ -1.17
Sox1P53783 Ppwd1-201ENSMUST00000022226 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
Sox1P53783 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox1P53783 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms