Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 AC158388.2-201ENSMUST00000223665 1314 ntBASIC7.66□□□□□ -1.18
Brca1P48754 AC154141.1-201ENSMUST00000208403 4136 ntBASIC7.66□□□□□ -1.18
Brca1P48754 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Brca1P48754 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.66□□□□□ -1.18
Brca1P48754 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Brca1P48754 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Brca1P48754 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Brca1P48754 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
Brca1P48754 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Gm38386-201ENSMUST00000194293 3421 ntBASIC7.66□□□□□ -1.18
Brca1P48754 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Gm42679-201ENSMUST00000197086 2906 ntBASIC7.66□□□□□ -1.18
Brca1P48754 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.66□□□□□ -1.18
Brca1P48754 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC7.66□□□□□ -1.18
Brca1P48754 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC7.66□□□□□ -1.18
Brca1P48754 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Snora47-201ENSMUST00000157483 138 ntBASIC7.66□□□□□ -1.18
Brca1P48754 Gm26037-201ENSMUST00000158150 311 ntBASIC7.66□□□□□ -1.18
Brca1P48754 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC7.66□□□□□ -1.18
Brca1P48754 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Gm37375-201ENSMUST00000193859 387 ntBASIC7.66□□□□□ -1.18
Brca1P48754 Gm37385-201ENSMUST00000195223 387 ntBASIC7.66□□□□□ -1.18
Brca1P48754 Gm43798-201ENSMUST00000202056 394 ntBASIC7.66□□□□□ -1.18
Brca1P48754 Gm44239-201ENSMUST00000204228 271 ntBASIC7.66□□□□□ -1.18
Brca1P48754 Gm18838-201ENSMUST00000204855 886 ntBASIC7.66□□□□□ -1.18
Brca1P48754 Gm5119-201ENSMUST00000215858 634 ntBASIC7.66□□□□□ -1.18
Brca1P48754 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.66□□□□□ -1.18
Brca1P48754 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Brca1P48754 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Brca1P48754 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Brca1P48754 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Brca1P48754 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Brca1P48754 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Brca1P48754 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.65□□□□□ -1.18
Brca1P48754 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Brca1P48754 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Brca1P48754 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Brca1P48754 Gm23910-201ENSMUST00000104597 132 ntBASIC7.65□□□□□ -1.18
Brca1P48754 Gm12262-201ENSMUST00000119915 305 ntBASIC7.65□□□□□ -1.18
Brca1P48754 Gm11848-201ENSMUST00000121207 973 ntBASIC7.65□□□□□ -1.18
Brca1P48754 Gm12618-201ENSMUST00000121754 483 ntBASIC7.65□□□□□ -1.18
Brca1P48754 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Brca1P48754 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.65□□□□□ -1.18
Brca1P48754 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC7.65□□□□□ -1.18
Brca1P48754 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.65□□□□□ -1.18
Brca1P48754 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Brca1P48754 Gm3841-201ENSMUST00000191399 451 ntBASIC7.65□□□□□ -1.18
Brca1P48754 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.65□□□□□ -1.18
Brca1P48754 Gm9293-201ENSMUST00000223096 306 ntBASIC7.65□□□□□ -1.18
Brca1P48754 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Brca1P48754 Snora44-201ENSMUST00000082670 129 ntBASIC7.65□□□□□ -1.18
Brca1P48754 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Brca1P48754 Gm6786-201ENSMUST00000203165 1915 ntBASIC7.65□□□□□ -1.18
Brca1P48754 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.18
Brca1P48754 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Brca1P48754 Gm42972-201ENSMUST00000196937 5617 ntBASIC7.65□□□□□ -1.19
Brca1P48754 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Brca1P48754 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Brca1P48754 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Brca1P48754 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Brca1P48754 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Brca1P48754 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
Brca1P48754 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Brca1P48754 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Brca1P48754 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Brca1P48754 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Brca1P48754 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Brca1P48754 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
Brca1P48754 Gm37897-201ENSMUST00000192613 3561 ntBASIC7.64□□□□□ -1.19
Brca1P48754 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Brca1P48754 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC7.64□□□□□ -1.19
Brca1P48754 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Brca1P48754 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Brca1P48754 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Brca1P48754 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Brca1P48754 Gm6181-201ENSMUST00000117187 264 ntBASIC7.64□□□□□ -1.19
Brca1P48754 Gm23539-201ENSMUST00000157537 224 ntBASIC7.64□□□□□ -1.19
Brca1P48754 Gm22599-201ENSMUST00000157597 132 ntBASIC7.64□□□□□ -1.19
Brca1P48754 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC7.64□□□□□ -1.19
Brca1P48754 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.64□□□□□ -1.19
Brca1P48754 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Brca1P48754 Gm21392-201ENSMUST00000182950 972 ntBASIC7.64□□□□□ -1.19
Brca1P48754 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC7.64□□□□□ -1.19
Brca1P48754 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC7.64□□□□□ -1.19
Brca1P48754 Gm45122-201ENSMUST00000206376 784 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms