Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx1-1G3UXB3 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx1-1G3UXB3 Cdh1-201ENSMUST00000000312 4430 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx1-1G3UXB3 Olfr329-ps-201ENSMUST00000108822 1300 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
Nkx1-1G3UXB3 Kng1-203ENSMUST00000089902 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx1-1G3UXB3 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nkx1-1G3UXB3 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Nkx1-1G3UXB3 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nkx1-1G3UXB3 AC154806.2-201ENSMUST00000227212 2385 ntBASIC10.28□□□□□ -0.76
Nkx1-1G3UXB3 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.76
Nkx1-1G3UXB3 Aplf-202ENSMUST00000065997 3132 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx1-1G3UXB3 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nkx1-1G3UXB3 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Prune2-207ENSMUST00000225351 2115 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 AC113125.1-201ENSMUST00000226852 1774 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Gm44847-201ENSMUST00000207104 1991 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Rdh12-202ENSMUST00000122227 1624 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Tspan9-203ENSMUST00000112173 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Gm14529-201ENSMUST00000117894 406 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Gm14175-201ENSMUST00000119835 241 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Gm23762-201ENSMUST00000158348 106 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Snora15-201ENSMUST00000177461 131 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Ighv1-29-201ENSMUST00000194116 342 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Gm38305-201ENSMUST00000194825 223 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Gm44580-201ENSMUST00000206333 877 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 CT030166.2-201ENSMUST00000222021 368 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 CT485612.3-201ENSMUST00000222179 408 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 AC122397.3-201ENSMUST00000227097 527 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 n-R5s28-201ENSMUST00000082814 119 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Txnip-201ENSMUST00000049093 2795 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 BC025920-202ENSMUST00000119492 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Gm17473-202ENSMUST00000228544 2071 ntBASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Nde1-202ENSMUST00000115795 2335 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nkx1-1G3UXB3 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Acsl6-205ENSMUST00000094194 2554 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 AC166341.5-201ENSMUST00000222206 1400 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Obp2b-201ENSMUST00000114192 732 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm26469-201ENSMUST00000116765 121 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm9159-201ENSMUST00000120661 566 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm14531-201ENSMUST00000120845 285 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm16523-201ENSMUST00000121253 592 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm25281-201ENSMUST00000157270 104 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm3585-201ENSMUST00000173438 875 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm8245-201ENSMUST00000182434 987 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm20162-201ENSMUST00000193629 871 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm7397-201ENSMUST00000208298 361 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm45870-201ENSMUST00000211269 601 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm45402-201ENSMUST00000211796 223 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm2649-201ENSMUST00000218825 610 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 AC107711.2-203ENSMUST00000227827 762 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm24411-201ENSMUST00000083428 131 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Ikbkap-201ENSMUST00000030140 6160 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Ovch2-201ENSMUST00000106755 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Tsnaxip1-201ENSMUST00000034365 2210 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Gm7337-202ENSMUST00000181439 2655 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkx1-1G3UXB3 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms