Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
Trim3Q9R1R2 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm22707-201ENSMUST00000103834 110 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm13878-201ENSMUST00000117986 577 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm13798-201ENSMUST00000118285 139 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm4911-201ENSMUST00000119388 945 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm12903-201ENSMUST00000121015 544 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm12630-201ENSMUST00000121575 784 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm28064-201ENSMUST00000185639 858 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm28443-201ENSMUST00000189081 698 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm28413-201ENSMUST00000189369 291 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm17833-201ENSMUST00000197629 1065 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm44943-201ENSMUST00000207254 300 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm44982-201ENSMUST00000208795 471 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm9604-201ENSMUST00000211175 433 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm34424-201ENSMUST00000213400 782 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.5□□□□□ -1.37
Trim3Q9R1R2 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm22671-201ENSMUST00000104420 134 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm13137-201ENSMUST00000118035 345 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm12104-201ENSMUST00000120359 979 ntBASIC6.49□□□□□ -1.37
Trim3Q9R1R2 Gm15842-201ENSMUST00000120513 618 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 125.6 ms