Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC151971.2-201ENSMUST00000217540 909 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 AC161275.1-201ENSMUST00000224668 208 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 AC154618.2-201ENSMUST00000228299 452 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm37278-201ENSMUST00000191619 2872 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Gm37474-201ENSMUST00000194812 1814 ntBASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Gm8089-201ENSMUST00000122463 968 ntBASIC7.74□□□□□ -1.17
Smc1aQ9CU62 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Gm24011-201ENSMUST00000157732 268 ntBASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Gm16138-201ENSMUST00000159341 821 ntBASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Gm16113-201ENSMUST00000159629 372 ntBASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Gm8550-201ENSMUST00000161621 653 ntBASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Gm2089-201ENSMUST00000218294 479 ntBASIC7.74□□□□□ -1.17
Smc1aQ9CU62 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.74□□□□□ -1.17
Smc1aQ9CU62 CT030182.4-201ENSMUST00000223647 645 ntBASIC7.74□□□□□ -1.17
Smc1aQ9CU62 AC154515.3-201ENSMUST00000225081 1159 ntBASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Gm5446-201ENSMUST00000091762 784 ntBASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Gm10568-201ENSMUST00000193244 1634 ntBASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Smc1aQ9CU62 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 AC122024.1-201ENSMUST00000219276 4850 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm12713-201ENSMUST00000118404 764 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm14158-201ENSMUST00000118409 308 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm13006-201ENSMUST00000118683 214 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm43725-201ENSMUST00000200122 369 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm44982-201ENSMUST00000208795 471 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gpr87-201ENSMUST00000056898 1080 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 AC103672.2-201ENSMUST00000228146 1687 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.73□□□□□ -1.17
Smc1aQ9CU62 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Smc1aQ9CU62 CT010470.1-201ENSMUST00000225364 1876 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms