Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm13900-201ENSMUST00000119402 498 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm9439-201ENSMUST00000119554 973 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm12104-201ENSMUST00000120359 979 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm23276-201ENSMUST00000157913 138 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 Mir1930-201ENSMUST00000158799 84 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm2976-201ENSMUST00000160362 513 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm23945-201ENSMUST00000179609 92 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Usp11Q99K46 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm9556-201ENSMUST00000182938 940 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm29496-201ENSMUST00000189854 693 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm7412-201ENSMUST00000191692 605 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm9604-201ENSMUST00000211175 433 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC7.19□□□□□ -1.26
Usp11Q99K46 CT009711.2-202ENSMUST00000224538 973 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 AC138604.2-201ENSMUST00000226620 921 ntBASIC7.19□□□□□ -1.26
Usp11Q99K46 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Usp11Q99K46 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Usp11Q99K46 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Usp11Q99K46 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Usp11Q99K46 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Usp11Q99K46 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.19□□□□□ -1.26
Usp11Q99K46 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Usp11Q99K46 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Usp11Q99K46 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Usp11Q99K46 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Usp11Q99K46 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Usp11Q99K46 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.19□□□□□ -1.26
Usp11Q99K46 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Usp11Q99K46 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Usp11Q99K46 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC7.19□□□□□ -1.26
Usp11Q99K46 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Usp11Q99K46 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Usp11Q99K46 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Usp11Q99K46 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm14869-201ENSMUST00000119007 884 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm15153-201ENSMUST00000119867 274 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm16284-201ENSMUST00000140995 400 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm16357-201ENSMUST00000144091 474 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm37669-201ENSMUST00000192184 820 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm37319-201ENSMUST00000193500 636 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm37871-201ENSMUST00000194973 688 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm30517-201ENSMUST00000197350 772 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm9419-201ENSMUST00000200672 567 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm44112-201ENSMUST00000204787 372 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm5528-201ENSMUST00000076314 480 ntBASIC7.18□□□□□ -1.26
Usp11Q99K46 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.18□□□□□ -1.26
Usp11Q99K46 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Usp11Q99K46 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Usp11Q99K46 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.17□□□□□ -1.26
Usp11Q99K46 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Usp11Q99K46 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.17□□□□□ -1.26
Usp11Q99K46 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms