Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 AC091783.1-201ENSMUST00000223614 1613 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm26079-201ENSMUST00000104066 133 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm14016-201ENSMUST00000119095 486 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm15049-201ENSMUST00000120474 463 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm15160-201ENSMUST00000120553 907 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm11581-201ENSMUST00000122024 763 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 BC064078-201ENSMUST00000122939 570 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm15843-201ENSMUST00000146593 529 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm24883-201ENSMUST00000158391 281 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm22569-201ENSMUST00000175545 124 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Mir6919-201ENSMUST00000185146 62 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm29470-201ENSMUST00000188007 696 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm29160-201ENSMUST00000190094 699 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm26413-202ENSMUST00000198972 127 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm45122-201ENSMUST00000206376 784 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm7419-201ENSMUST00000209962 925 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 AC127224.1-201ENSMUST00000218094 453 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Olfr809-203ENSMUST00000218237 1100 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gm43775-201ENSMUST00000201019 3395 ntBASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Nup35Q8R4R6 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm24473-201ENSMUST00000104483 131 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm13414-201ENSMUST00000117516 727 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm13469-201ENSMUST00000118231 350 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm5270-201ENSMUST00000121506 1002 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm13237-201ENSMUST00000122151 635 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm26023-201ENSMUST00000122722 313 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm25962-201ENSMUST00000157173 168 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm23392-201ENSMUST00000157580 113 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm26486-201ENSMUST00000158021 110 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
Nup35Q8R4R6 n-R5s93-201ENSMUST00000180091 119 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm8245-201ENSMUST00000182434 987 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm5181-201ENSMUST00000183140 971 ntBASIC5.45□□□□□ -1.54
Nup35Q8R4R6 Gm18254-201ENSMUST00000185699 1204 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms