Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm23467-201ENSMUST00000157127 159 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm22186-201ENSMUST00000157822 122 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm6838-201ENSMUST00000172851 582 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm26652-202ENSMUST00000181672 475 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Mir8099-2-201ENSMUST00000183568 127 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Mir8099-1-201ENSMUST00000184238 127 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Mir8095-201ENSMUST00000185103 129 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm4545-201ENSMUST00000190797 603 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm17967-201ENSMUST00000195319 647 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm33778-201ENSMUST00000216884 704 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 AC079644.3-201ENSMUST00000222452 357 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 AC165283.1-201ENSMUST00000223390 307 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm6284-201ENSMUST00000209609 4287 ntBASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim47Q8C0E3 Gm14404-201ENSMUST00000119117 1660 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm7571-201ENSMUST00000120252 927 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm15843-201ENSMUST00000146593 529 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm22915-201ENSMUST00000157615 136 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm22636-201ENSMUST00000158142 275 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm8164-201ENSMUST00000169120 1192 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Mir5101-201ENSMUST00000175181 83 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm37392-201ENSMUST00000192098 516 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm37977-201ENSMUST00000193096 721 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm38305-201ENSMUST00000194825 223 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm38430-201ENSMUST00000209888 1240 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm19232-201ENSMUST00000211621 652 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm7392-201ENSMUST00000217815 345 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 AC154904.1-201ENSMUST00000219510 312 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 AC163041.1-201ENSMUST00000221984 133 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 AC154329.2-201ENSMUST00000225257 383 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 AC139569.1-201ENSMUST00000226080 614 ntBASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Trim47Q8C0E3 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Trim47Q8C0E3 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Trim47Q8C0E3 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC8.65□□□□□ -1.03
Trim47Q8C0E3 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Trim47Q8C0E3 AC122426.1-201ENSMUST00000214736 2235 ntBASIC8.65□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms