Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm35323-201ENSMUST00000191836 499 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm38229-201ENSMUST00000191931 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm32347-201ENSMUST00000192944 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm38121-201ENSMUST00000193213 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm38035-201ENSMUST00000194427 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm38350-201ENSMUST00000194789 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm37990-201ENSMUST00000195821 696 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm42782-201ENSMUST00000197286 522 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm42883-201ENSMUST00000202594 222 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm44112-201ENSMUST00000204787 372 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm20136-201ENSMUST00000207501 891 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7□□□□□ -1.29
Trub1Q8C0D0 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 AC131117.2-202ENSMUST00000224539 547 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 AC133598.4-201ENSMUST00000224577 454 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Trub1Q8C0D0 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trub1Q8C0D0 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7□□□□□ -1.29
Trub1Q8C0D0 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC7□□□□□ -1.29
Trub1Q8C0D0 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm43961-201ENSMUST00000203289 1872 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7□□□□□ -1.29
Trub1Q8C0D0 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC7□□□□□ -1.29
Trub1Q8C0D0 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trub1Q8C0D0 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Gm20706-201ENSMUST00000175985 2023 ntBASIC7□□□□□ -1.29
Trub1Q8C0D0 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm12242-201ENSMUST00000118824 738 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm11517-201ENSMUST00000119491 387 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm13754-201ENSMUST00000120486 998 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm37493-201ENSMUST00000193167 433 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm38430-201ENSMUST00000209888 1240 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm18781-201ENSMUST00000211252 924 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm46203-201ENSMUST00000218130 478 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Gm5446-201ENSMUST00000091762 784 ntBASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Trub1Q8C0D0 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.98□□□□□ -1.29
Trub1Q8C0D0 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms