Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm8055-201ENSMUST00000099956 1008 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Adam17-201ENSMUST00000064536 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Zfp185-203ENSMUST00000164800 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Hemgn-202ENSMUST00000107764 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Cabyr-206ENSMUST00000186263 2125 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 AC164297.2-201ENSMUST00000224388 1508 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Med24-201ENSMUST00000017354 3410 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm38148-201ENSMUST00000195166 3012 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Tmem106a-202ENSMUST00000100403 2428 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gabrr3-201ENSMUST00000114341 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Rpgr-204ENSMUST00000115532 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Ptpn5-202ENSMUST00000102626 3137 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 CT010575.1-201ENSMUST00000220666 2924 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm12713-201ENSMUST00000118404 764 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm14901-201ENSMUST00000119001 283 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Olfr330-201ENSMUST00000134055 1134 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC9.62□□□□□ -0.87
Trim35Q8C006 4933428C19Rik-201ENSMUST00000146043 818 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm22563-201ENSMUST00000157333 269 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm21762-201ENSMUST00000177561 456 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm20924-201ENSMUST00000177663 684 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm20816-201ENSMUST00000177765 684 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm20909-201ENSMUST00000178234 684 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm24897-201ENSMUST00000179033 107 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm20747-201ENSMUST00000179137 684 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm21721-201ENSMUST00000179595 684 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm20809-201ENSMUST00000179663 684 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm27037-201ENSMUST00000182270 960 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm4526-201ENSMUST00000186039 920 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm21683-201ENSMUST00000186201 678 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm28149-201ENSMUST00000187102 378 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm20801-201ENSMUST00000187654 678 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm20879-201ENSMUST00000188719 695 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm28768-201ENSMUST00000189034 378 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm29267-201ENSMUST00000191020 378 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm21872-201ENSMUST00000191488 678 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm28070-201ENSMUST00000191502 445 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm38132-201ENSMUST00000193358 707 ntTSL 3 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm34780-201ENSMUST00000193896 949 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm9088-201ENSMUST00000220237 508 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 AC166358.7-201ENSMUST00000221132 108 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm36501-201ENSMUST00000221857 745 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 AC126554.1-201ENSMUST00000222161 271 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 AC125543.5-201ENSMUST00000222799 108 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 AC154467.1-201ENSMUST00000227527 449 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 AC123860.1-201ENSMUST00000228033 481 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 4930533K18Rik-201ENSMUST00000058942 1259 ntTSL 5 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Trim35Q8C006 A830005F24Rik-201ENSMUST00000065465 786 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm25202-201ENSMUST00000082838 191 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Grxcr2-201ENSMUST00000097591 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Itih1-201ENSMUST00000006704 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Cd200-202ENSMUST00000163230 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Lrrc15-201ENSMUST00000064606 5310 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm37694-201ENSMUST00000191696 2133 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gm43119-201ENSMUST00000196957 2122 ntBASIC9.62□□□□□ -0.87
Trim35Q8C006 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Olfr1219-202ENSMUST00000213724 5669 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trim35Q8C006 2310005A03Rik-201ENSMUST00000142569 1398 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim35Q8C006 Cacna1c-213ENSMUST00000188078 6519 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Cacna1c-217ENSMUST00000188865 6519 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trim35Q8C006 Ankmy1-201ENSMUST00000112998 3243 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Trim35Q8C006 Dhx35-201ENSMUST00000029186 3212 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim35Q8C006 Gm10874-201ENSMUST00000100526 2355 ntTSL 2 BASIC9.61□□□□□ -0.87
Trim35Q8C006 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim35Q8C006 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC9.61□□□□□ -0.87
Trim35Q8C006 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim35Q8C006 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim35Q8C006 AC130661.1-201ENSMUST00000218248 1680 ntBASIC9.61□□□□□ -0.87
Trim35Q8C006 Lhx6-204ENSMUST00000112966 3188 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim35Q8C006 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC9.61□□□□□ -0.87
Trim35Q8C006 Celf2-213ENSMUST00000150624 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim35Q8C006 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC9.61□□□□□ -0.87
Trim35Q8C006 4930552P12Rik-201ENSMUST00000181198 2496 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim35Q8C006 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC9.61□□□□□ -0.87
Trim35Q8C006 Dpp8-202ENSMUST00000167773 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim35Q8C006 Armcx2-207ENSMUST00000168264 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim35Q8C006 Gm7001-201ENSMUST00000219384 1465 ntBASIC9.61□□□□□ -0.87
Trim35Q8C006 Il6st-203ENSMUST00000183663 8678 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim35Q8C006 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim35Q8C006 Gm43319-201ENSMUST00000198036 2270 ntBASIC9.61□□□□□ -0.87
Trim35Q8C006 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim35Q8C006 Sox5-205ENSMUST00000111749 3879 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms