Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.05□□□□□ -1.28
Sh3rf2Q8BZT2 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm14659-201ENSMUST00000117667 843 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm6654-201ENSMUST00000118950 348 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm11553-201ENSMUST00000120682 240 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm7494-201ENSMUST00000121248 441 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm14603-201ENSMUST00000121275 448 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm25026-201ENSMUST00000175017 188 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm25574-201ENSMUST00000175245 249 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm9285-201ENSMUST00000177691 697 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm21301-201ENSMUST00000189476 699 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm20239-201ENSMUST00000196610 982 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm18012-201ENSMUST00000204558 773 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm7252-201ENSMUST00000223284 456 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 AW822073-201ENSMUST00000075305 555 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 AC154806.2-201ENSMUST00000227212 2385 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sh3rf2Q8BZT2 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Gm23768-201ENSMUST00000104440 131 ntBASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Gm6461-201ENSMUST00000120015 633 ntBASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Gm12540-201ENSMUST00000121938 319 ntBASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Gm8089-201ENSMUST00000122463 968 ntBASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Sh3rf2Q8BZT2 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms