Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm27299-201ENSMUST00000184593 103 ntBASIC9.62□□□□□ -0.87
Usp47Q8BY87 Gm37493-201ENSMUST00000193167 433 ntBASIC9.62□□□□□ -0.87
Usp47Q8BY87 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC9.62□□□□□ -0.87
Usp47Q8BY87 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Usp47Q8BY87 AC107663.1-201ENSMUST00000224257 468 ntBASIC9.62□□□□□ -0.87
Usp47Q8BY87 AC132260.1-201ENSMUST00000225499 734 ntBASIC9.62□□□□□ -0.87
Usp47Q8BY87 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm43557-201ENSMUST00000197100 2370 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm21036-201ENSMUST00000207544 2611 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm37373-201ENSMUST00000194005 2812 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm43769-201ENSMUST00000201871 4323 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm37786-201ENSMUST00000191714 3225 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm26079-201ENSMUST00000104066 133 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm12939-201ENSMUST00000117303 165 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm11445-201ENSMUST00000119101 532 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm13357-201ENSMUST00000120528 537 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm24781-201ENSMUST00000157636 117 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Mir7046-201ENSMUST00000183435 66 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm42708-201ENSMUST00000196332 905 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Igkv4-83-201ENSMUST00000196933 334 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm36448-201ENSMUST00000199916 438 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp47Q8BY87 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp47Q8BY87 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm17849-201ENSMUST00000219788 853 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm7441-201ENSMUST00000220697 1074 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 AC154573.2-201ENSMUST00000224174 378 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp47Q8BY87 Gm43537-201ENSMUST00000199064 3110 ntBASIC9.61□□□□□ -0.87
Usp47Q8BY87 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Gm15930-201ENSMUST00000156603 2037 ntBASIC9.6□□□□□ -0.87
Usp47Q8BY87 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Gm37518-201ENSMUST00000194930 2603 ntBASIC9.6□□□□□ -0.87
Usp47Q8BY87 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Gm20691-201ENSMUST00000176889 333 ntBASIC9.6□□□□□ -0.87
Usp47Q8BY87 Gm28620-201ENSMUST00000190463 439 ntBASIC9.6□□□□□ -0.87
Usp47Q8BY87 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp47Q8BY87 AC163667.1-201ENSMUST00000225201 1289 ntBASIC9.6□□□□□ -0.87
Usp47Q8BY87 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Usp47Q8BY87 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 AC153143.2-201ENSMUST00000220999 1804 ntBASIC9.59□□□□□ -0.87
Usp47Q8BY87 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC9.59□□□□□ -0.87
Usp47Q8BY87 Gm6101-201ENSMUST00000195384 1867 ntBASIC9.59□□□□□ -0.87
Usp47Q8BY87 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp47Q8BY87 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms