Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Chmp2bQ8BJF9 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Chmp2bQ8BJF9 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Chmp2bQ8BJF9 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
Chmp2bQ8BJF9 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.96□□□□□ -1.29
Chmp2bQ8BJF9 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Chmp2bQ8BJF9 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
Chmp2bQ8BJF9 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Chmp2bQ8BJF9 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm6746-201ENSMUST00000108774 483 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm14279-201ENSMUST00000117142 332 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm10243-201ENSMUST00000117571 333 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm12630-201ENSMUST00000121575 784 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm5656-201ENSMUST00000171020 1096 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm43812-202ENSMUST00000202701 581 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm44111-201ENSMUST00000204649 399 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 AV026068-218ENSMUST00000223980 575 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm10247-201ENSMUST00000090395 333 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Chmp2bQ8BJF9 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm14539-201ENSMUST00000117527 174 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm12331-201ENSMUST00000119927 622 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm12297-201ENSMUST00000121380 979 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm24923-201ENSMUST00000178201 88 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm26528-201ENSMUST00000181965 283 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm6472-202ENSMUST00000187973 582 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm3841-201ENSMUST00000191399 451 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm4270-201ENSMUST00000209666 406 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm46424-201ENSMUST00000221567 168 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm7731-201ENSMUST00000091759 470 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.95□□□□□ -1.3
Chmp2bQ8BJF9 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms