Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
PrkdcP97313 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PrkdcP97313 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm45182-201ENSMUST00000207579 2404 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 CT030185.1-201ENSMUST00000222940 2289 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm43343-201ENSMUST00000202454 1926 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm23884-201ENSMUST00000122687 294 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm43846-201ENSMUST00000200502 932 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
PrkdcP97313 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PrkdcP97313 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Arhgap6-205ENSMUST00000112131 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm37518-201ENSMUST00000194930 2603 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm22262-201ENSMUST00000158713 86 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Gm21850-201ENSMUST00000179792 359 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Gm37024-201ENSMUST00000192224 868 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC4.51□□□□□ -1.69
PrkdcP97313 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC4.51□□□□□ -1.69
PrkdcP97313 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Il6st-203ENSMUST00000183663 8678 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Gm9894-201ENSMUST00000171257 2904 ntBASIC4.51□□□□□ -1.69
PrkdcP97313 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PrkdcP97313 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm18880-201ENSMUST00000223333 1541 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Gm37321-201ENSMUST00000195742 1872 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm15016-201ENSMUST00000117300 720 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC4.5□□□□□ -1.69
PrkdcP97313 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm8480-201ENSMUST00000190350 698 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 AC105950.1-201ENSMUST00000222637 408 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PrkdcP97313 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm42874-201ENSMUST00000198888 1774 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC4.5□□□□□ -1.69
PrkdcP97313 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm38042-201ENSMUST00000191614 5208 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm9499-201ENSMUST00000180888 964 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Mir7056-201ENSMUST00000183776 59 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Gm27219-201ENSMUST00000184633 742 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC4.5□□□□□ -1.69
PrkdcP97313 AC129537.1-201ENSMUST00000226596 1228 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm43421-201ENSMUST00000200044 2905 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PrkdcP97313 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PrkdcP97313 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC4.5□□□□□ -1.69
PrkdcP97313 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC4.5□□□□□ -1.69
PrkdcP97313 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Slco2b1-201ENSMUST00000032985 4381 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PrkdcP97313 Gm44417-201ENSMUST00000203298 3359 ntBASIC4.5□□□□□ -1.69
PrkdcP97313 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms