Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
H3f3aP84244 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm25593-201ENSMUST00000102272 96 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm6451-201ENSMUST00000121488 717 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.12□□□□□ -1.43
H3f3aP84244 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm25722-201ENSMUST00000157498 279 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Gm23891-201ENSMUST00000158114 138 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm27360-201ENSMUST00000183487 80 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Gm27866-201ENSMUST00000184459 171 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm44252-201ENSMUST00000204187 330 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Gm9357-201ENSMUST00000207138 805 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
H3f3aP84244 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Gm6887-201ENSMUST00000080945 482 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Gm24411-201ENSMUST00000083428 131 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Gm5446-201ENSMUST00000091762 784 ntBASIC6.12□□□□□ -1.43
H3f3aP84244 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
H3f3aP84244 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.12□□□□□ -1.43
H3f3aP84244 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3f3aP84244 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
H3f3aP84244 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
H3f3aP84244 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
H3f3aP84244 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.11□□□□□ -1.43
H3f3aP84244 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
H3f3aP84244 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3f3aP84244 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Gm24473-201ENSMUST00000104483 131 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Gm14864-201ENSMUST00000116164 1087 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Gm15310-201ENSMUST00000117891 372 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Gm13137-201ENSMUST00000118035 345 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Gm11581-201ENSMUST00000122024 763 ntBASIC6.11□□□□□ -1.43
H3f3aP84244 Gm13237-201ENSMUST00000122151 635 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms