Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdh11P55288 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdh11P55288 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdh11P55288 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdh11P55288 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdh11P55288 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdh11P55288 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdh11P55288 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdh11P55288 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.28□□□□□ -1.4
Cdh11P55288 AC091783.1-201ENSMUST00000223614 1613 ntBASIC6.28□□□□□ -1.4
Cdh11P55288 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdh11P55288 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdh11P55288 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdh11P55288 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdh11P55288 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cdh11P55288 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.4
Cdh11P55288 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.4
Cdh11P55288 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.4
Cdh11P55288 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Gm37891-201ENSMUST00000195585 1326 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdh11P55288 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdh11P55288 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdh11P55288 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdh11P55288 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.27□□□□□ -1.41
Cdh11P55288 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdh11P55288 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdh11P55288 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cdh11P55288 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.27□□□□□ -1.41
Cdh11P55288 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdh11P55288 Gm8812-201ENSMUST00000118496 412 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Gm13486-201ENSMUST00000119910 282 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Gm12535-201ENSMUST00000121025 484 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Gm14603-201ENSMUST00000121275 448 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdh11P55288 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdh11P55288 Gm25281-201ENSMUST00000157270 104 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Gm2976-201ENSMUST00000160362 513 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cdh11P55288 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cdh11P55288 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdh11P55288 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Gm44943-201ENSMUST00000207254 300 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 AC127224.1-201ENSMUST00000218094 453 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Mylf-ps-201ENSMUST00000222174 421 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cdh11P55288 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cdh11P55288 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Cdh11P55288 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdh11P55288 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.27□□□□□ -1.41
Cdh11P55288 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdh11P55288 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdh11P55288 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdh11P55288 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Cdh11P55288 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh11P55288 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh11P55288 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.26□□□□□ -1.41
Cdh11P55288 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.26□□□□□ -1.41
Cdh11P55288 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.26□□□□□ -1.41
Cdh11P55288 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh11P55288 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh11P55288 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Cdh11P55288 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Cdh11P55288 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh11P55288 Gm12635-201ENSMUST00000117285 752 ntBASIC6.26□□□□□ -1.41
Cdh11P55288 Gm14251-201ENSMUST00000122133 279 ntBASIC6.26□□□□□ -1.41
Cdh11P55288 Gm8577-201ENSMUST00000122420 986 ntBASIC6.26□□□□□ -1.41
Cdh11P55288 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdh11P55288 Gm4613-201ENSMUST00000165488 276 ntBASIC6.26□□□□□ -1.41
Cdh11P55288 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdh11P55288 Gm5656-201ENSMUST00000171020 1096 ntBASIC6.26□□□□□ -1.41
Cdh11P55288 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh11P55288 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.26□□□□□ -1.41
Cdh11P55288 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdh11P55288 Gm8192-201ENSMUST00000182196 958 ntBASIC6.26□□□□□ -1.41
Cdh11P55288 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdh11P55288 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdh11P55288 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 117.2 ms