Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm45360-201ENSMUST00000210698 1405 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Nub1P54729 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Gm6558-201ENSMUST00000191934 1973 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Gm44584-201ENSMUST00000208395 2880 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Gm24462-201ENSMUST00000102430 106 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Nub1P54729 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Nub1P54729 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC8.12□□□□□ -1.11
Nub1P54729 Gm4342-201ENSMUST00000118982 367 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Gm12642-201ENSMUST00000121098 876 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Gm14053-201ENSMUST00000121662 470 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Gm16456-201ENSMUST00000174431 920 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Nub1P54729 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Gm29356-201ENSMUST00000186935 373 ntBASIC8.12□□□□□ -1.11
Nub1P54729 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC8.12□□□□□ -1.11
Nub1P54729 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC8.12□□□□□ -1.11
Nub1P54729 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC8.12□□□□□ -1.11
Nub1P54729 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC8.12□□□□□ -1.11
Nub1P54729 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC8.12□□□□□ -1.11
Nub1P54729 AC123062.1-201ENSMUST00000221287 481 ntBASIC8.12□□□□□ -1.11
Nub1P54729 CT009765.2-201ENSMUST00000221331 392 ntBASIC8.12□□□□□ -1.11
Nub1P54729 CT009556.3-201ENSMUST00000226173 513 ntBASIC8.12□□□□□ -1.11
Nub1P54729 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Nub1P54729 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Nub1P54729 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Nub1P54729 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Nub1P54729 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Nub1P54729 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.12□□□□□ -1.11
Nub1P54729 Gm45001-201ENSMUST00000208279 2515 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.12□□□□□ -1.11
Nub1P54729 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Nub1P54729 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Nub1P54729 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Nub1P54729 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 AC116476.1-201ENSMUST00000226274 2318 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Nub1P54729 AC166341.5-201ENSMUST00000222206 1400 ntBASIC8.12□□□□□ -1.11
Nub1P54729 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC8.11□□□□□ -1.11
Nub1P54729 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC8.11□□□□□ -1.11
Nub1P54729 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Gm22426-201ENSMUST00000103811 96 ntBASIC8.11□□□□□ -1.11
Nub1P54729 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Nub1P54729 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Gm7803-201ENSMUST00000117176 1015 ntBASIC8.11□□□□□ -1.11
Nub1P54729 Gm11991-201ENSMUST00000119652 1074 ntBASIC8.11□□□□□ -1.11
Nub1P54729 Gm15763-201ENSMUST00000120136 403 ntBASIC8.11□□□□□ -1.11
Nub1P54729 Gm9435-201ENSMUST00000120379 877 ntBASIC8.11□□□□□ -1.11
Nub1P54729 Gm13622-201ENSMUST00000120658 433 ntBASIC8.11□□□□□ -1.11
Nub1P54729 Gm13221-201ENSMUST00000121712 430 ntBASIC8.11□□□□□ -1.11
Nub1P54729 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Gm16359-201ENSMUST00000124511 289 ntBASIC8.11□□□□□ -1.11
Nub1P54729 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.11□□□□□ -1.11
Nub1P54729 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC8.11□□□□□ -1.11
Nub1P54729 Gm16357-201ENSMUST00000144091 474 ntBASIC8.11□□□□□ -1.11
Nub1P54729 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Nub1P54729 Gm15843-201ENSMUST00000146593 529 ntBASIC8.11□□□□□ -1.11
Nub1P54729 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC8.11□□□□□ -1.11
Nub1P54729 Gm23082-201ENSMUST00000157852 133 ntBASIC8.11□□□□□ -1.11
Nub1P54729 Atp2b4-208ENSMUST00000167348 243 ntBASIC8.11□□□□□ -1.11
Nub1P54729 Gm7393-201ENSMUST00000172650 739 ntBASIC8.11□□□□□ -1.11
Nub1P54729 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
Nub1P54729 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC8.11□□□□□ -1.11
Nub1P54729 Gm26914-201ENSMUST00000182262 223 ntBASIC8.11□□□□□ -1.11
Nub1P54729 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms