Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm28492-201ENSMUST00000190899 1019 ntBASIC8.09□□□□□ -1.11
Traf1P39428 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC8.09□□□□□ -1.11
Traf1P39428 Gm42580-201ENSMUST00000197223 753 ntBASIC8.09□□□□□ -1.11
Traf1P39428 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Traf1P39428 Gm44565-201ENSMUST00000208194 269 ntBASIC8.09□□□□□ -1.11
Traf1P39428 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC8.09□□□□□ -1.11
Traf1P39428 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Traf1P39428 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.09□□□□□ -1.11
Traf1P39428 CT030238.4-202ENSMUST00000226143 745 ntBASIC8.09□□□□□ -1.11
Traf1P39428 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Traf1P39428 Mir7b-201ENSMUST00000083557 111 ntBASIC8.09□□□□□ -1.11
Traf1P39428 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Traf1P39428 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Traf1P39428 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Traf1P39428 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC8.09□□□□□ -1.11
Traf1P39428 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.09□□□□□ -1.11
Traf1P39428 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Traf1P39428 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Traf1P39428 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Traf1P39428 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.09□□□□□ -1.11
Traf1P39428 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Traf1P39428 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Traf1P39428 Gm43483-201ENSMUST00000196724 2860 ntBASIC8.08□□□□□ -1.12
Traf1P39428 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.08□□□□□ -1.12
Traf1P39428 Gm20749-201ENSMUST00000186319 3492 ntBASIC8.08□□□□□ -1.12
Traf1P39428 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Traf1P39428 Gm23657-201ENSMUST00000122623 294 ntBASIC8.08□□□□□ -1.12
Traf1P39428 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC8.08□□□□□ -1.12
Traf1P39428 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC8.08□□□□□ -1.12
Traf1P39428 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Traf1P39428 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Traf1P39428 Gm44227-201ENSMUST00000203576 241 ntBASIC8.08□□□□□ -1.12
Traf1P39428 CT009738.1-201ENSMUST00000219031 809 ntBASIC8.08□□□□□ -1.12
Traf1P39428 AC155270.1-202ENSMUST00000221503 352 ntBASIC8.08□□□□□ -1.12
Traf1P39428 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC8.08□□□□□ -1.12
Traf1P39428 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC8.08□□□□□ -1.12
Traf1P39428 AC154323.2-201ENSMUST00000226557 1151 ntBASIC8.08□□□□□ -1.12
Traf1P39428 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC8.08□□□□□ -1.12
Traf1P39428 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Traf1P39428 Snora21-201ENSMUST00000082967 137 ntBASIC8.08□□□□□ -1.12
Traf1P39428 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC8.08□□□□□ -1.12
Traf1P39428 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Traf1P39428 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Traf1P39428 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Traf1P39428 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC8.08□□□□□ -1.12
Traf1P39428 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Traf1P39428 Gm44584-201ENSMUST00000208395 2880 ntBASIC8.08□□□□□ -1.12
Traf1P39428 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.08□□□□□ -1.12
Traf1P39428 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Traf1P39428 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 Gm43872-201ENSMUST00000203218 2213 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.07□□□□□ -1.12
Traf1P39428 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Traf1P39428 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.07□□□□□ -1.12
Traf1P39428 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Traf1P39428 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Traf1P39428 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 Gm13156-201ENSMUST00000118348 321 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Gm5843-201ENSMUST00000121631 476 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Gm25178-201ENSMUST00000122633 325 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.07□□□□□ -1.12
Traf1P39428 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 Gm24545-201ENSMUST00000158651 85 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC8.07□□□□□ -1.12
Traf1P39428 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Gm37310-201ENSMUST00000195237 2968 ntBASIC8.07□□□□□ -1.12
Traf1P39428 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Traf1P39428 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Traf1P39428 Gpr87-201ENSMUST00000056898 1080 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Traf1P39428 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.07□□□□□ -1.12
Traf1P39428 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Traf1P39428 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms