Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC133598.2-201ENSMUST00000224302 624 ntBASIC6.82□□□□□ -1.32
Lire1P11260 AC138604.2-201ENSMUST00000226620 921 ntBASIC6.82□□□□□ -1.32
Lire1P11260 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.82□□□□□ -1.32
Lire1P11260 AC165154.2-201ENSMUST00000227310 336 ntBASIC6.82□□□□□ -1.32
Lire1P11260 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.82□□□□□ -1.32
Lire1P11260 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Lire1P11260 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Lire1P11260 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Lire1P11260 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Lire1P11260 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Lire1P11260 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Lire1P11260 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm17083-201ENSMUST00000165849 1366 ntBASIC6.82□□□□□ -1.32
Lire1P11260 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Lire1P11260 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Lire1P11260 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.81□□□□□ -1.32
Lire1P11260 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Lire1P11260 Gm25631-201ENSMUST00000104390 130 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Gm12959-201ENSMUST00000119396 403 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm13680-201ENSMUST00000119790 793 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm13740-201ENSMUST00000120590 310 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 Gm24139-201ENSMUST00000122780 288 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC6.81□□□□□ -1.32
Lire1P11260 Gm26505-201ENSMUST00000176208 166 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm27866-201ENSMUST00000184459 171 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm21181-201ENSMUST00000186249 330 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Lire1P11260 Gm29355-201ENSMUST00000188178 697 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm28953-201ENSMUST00000188336 697 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 Gm20788-201ENSMUST00000190538 697 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm18797-201ENSMUST00000190809 1174 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm37395-201ENSMUST00000194721 697 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC6.81□□□□□ -1.32
Lire1P11260 Gm27680-202ENSMUST00000199221 807 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm43226-201ENSMUST00000202438 259 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm44431-201ENSMUST00000203500 413 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm20136-201ENSMUST00000207501 891 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm8575-201ENSMUST00000210262 521 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 Gm45900-201ENSMUST00000211879 409 ntBASIC6.81□□□□□ -1.32
Lire1P11260 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC6.81□□□□□ -1.32
Lire1P11260 AC238940.2-201ENSMUST00000224202 330 ntBASIC6.81□□□□□ -1.32
Lire1P11260 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Lire1P11260 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Gm43623-201ENSMUST00000199289 2663 ntBASIC6.81□□□□□ -1.32
Lire1P11260 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Lire1P11260 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Lire1P11260 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Lire1P11260 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.8□□□□□ -1.32
Lire1P11260 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Lire1P11260 Gm24195-201ENSMUST00000116804 137 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Gm14480-201ENSMUST00000118521 433 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Gm11198-201ENSMUST00000119771 974 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC6.8□□□□□ -1.32
Lire1P11260 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms