Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm6494-201ENSMUST00000218604 2298 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Lpar2-201ENSMUST00000034325 5701 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Grik1-209ENSMUST00000227986 2942 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Col4a1P02463 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
Col4a1P02463 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC8.24□□□□□ -1.09
Col4a1P02463 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.24□□□□□ -1.09
Col4a1P02463 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm13265-201ENSMUST00000118090 421 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Gm13930-201ENSMUST00000118569 368 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Gm6446-201ENSMUST00000120604 818 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Gm23632-201ENSMUST00000175289 125 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Mir3473e-201ENSMUST00000183932 110 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Gm33178-201ENSMUST00000212090 257 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Gm3266-201ENSMUST00000217832 591 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 AC122459.2-201ENSMUST00000227099 638 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Gm8256-203ENSMUST00000228692 591 ntBASIC8.24□□□□□ -1.09
Col4a1P02463 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC8.24□□□□□ -1.09
Col4a1P02463 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Col4a1P02463 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col4a1P02463 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Col4a1P02463 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 Gm14935-201ENSMUST00000121528 1708 ntBASIC8.23□□□□□ -1.09
Col4a1P02463 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.23□□□□□ -1.09
Col4a1P02463 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Col4a1P02463 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Col4a1P02463 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 Gm22371-201ENSMUST00000104588 130 ntBASIC8.23□□□□□ -1.09
Col4a1P02463 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC8.23□□□□□ -1.09
Col4a1P02463 Gm9529-201ENSMUST00000177598 579 ntBASIC8.23□□□□□ -1.09
Col4a1P02463 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC8.23□□□□□ -1.09
Col4a1P02463 Gm43354-201ENSMUST00000196862 346 ntBASIC8.23□□□□□ -1.09
Col4a1P02463 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC8.23□□□□□ -1.09
Col4a1P02463 Gm43116-201ENSMUST00000199789 195 ntBASIC8.23□□□□□ -1.09
Col4a1P02463 Gm18103-201ENSMUST00000216621 779 ntBASIC8.23□□□□□ -1.09
Col4a1P02463 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Col4a1P02463 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Col4a1P02463 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.23□□□□□ -1.09
Col4a1P02463 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Col4a1P02463 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
Col4a1P02463 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC8.23□□□□□ -1.09
Col4a1P02463 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col4a1P02463 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Col4a1P02463 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Col4a1P02463 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col4a1P02463 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col4a1P02463 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col4a1P02463 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Col4a1P02463 Gm22372-201ENSMUST00000104589 136 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 Gm14529-201ENSMUST00000117894 406 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 Gm12833-201ENSMUST00000136112 477 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC8.22□□□□□ -1.09
Col4a1P02463 Gm15257-201ENSMUST00000177680 883 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 Gm15252-201ENSMUST00000177750 883 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 Gm15256-201ENSMUST00000177793 883 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 Gm15260-201ENSMUST00000179402 883 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col4a1P02463 Gm5853-201ENSMUST00000197183 632 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC8.22□□□□□ -1.09
Col4a1P02463 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC8.22□□□□□ -1.09
Col4a1P02463 Olfr923-204ENSMUST00000219798 1068 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 AC119894.1-201ENSMUST00000220399 350 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 AC161252.1-201ENSMUST00000225536 467 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 AC159205.4-201ENSMUST00000225964 704 ntBASIC8.22□□□□□ -1.09
Col4a1P02463 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Col4a1P02463 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms