Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col4a6B1AVK5 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Gm6181-201ENSMUST00000117187 264 ntBASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Gm26037-201ENSMUST00000158150 311 ntBASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Gm26357-201ENSMUST00000158218 115 ntBASIC7.01□□□□□ -1.29
Col4a6B1AVK5 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Gm26570-201ENSMUST00000180672 342 ntBASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Gm28322-201ENSMUST00000185627 1475 ntBASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 9530053A07Rik-204ENSMUST00000150948 7895 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col4a6B1AVK5 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Mir466j-201ENSMUST00000116876 122 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm11622-201ENSMUST00000120525 691 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm23891-201ENSMUST00000158114 138 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm24179-201ENSMUST00000158925 127 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm27853-201ENSMUST00000184176 250 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm37475-201ENSMUST00000193107 1015 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm34149-201ENSMUST00000203547 304 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm18839-201ENSMUST00000204292 670 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm46364-201ENSMUST00000218548 319 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 AC166358.9-201ENSMUST00000220653 375 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm37423-201ENSMUST00000194246 3342 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm37518-201ENSMUST00000194930 2603 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm44704-201ENSMUST00000208963 1990 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col4a6B1AVK5 AC122769.3-201ENSMUST00000227739 3245 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm26079-201ENSMUST00000104066 133 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm24888-201ENSMUST00000104387 130 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm24065-201ENSMUST00000157487 264 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm22529-201ENSMUST00000158817 123 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm7152-201ENSMUST00000163570 605 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm20691-201ENSMUST00000176889 333 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm43354-201ENSMUST00000196862 346 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm44770-201ENSMUST00000205395 1264 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col4a6B1AVK5 Gm43728-201ENSMUST00000198817 2622 ntBASIC7□□□□□ -1.29
Col4a6B1AVK5 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col4a6B1AVK5 CT010514.1-201ENSMUST00000214088 2969 ntBASIC6.99□□□□□ -1.29
Col4a6B1AVK5 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.99□□□□□ -1.29
Col4a6B1AVK5 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col4a6B1AVK5 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.99□□□□□ -1.29
Col4a6B1AVK5 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col4a6B1AVK5 Rian-209ENSMUST00000182406 3476 ntBASIC6.99□□□□□ -1.29
Col4a6B1AVK5 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col4a6B1AVK5 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.99□□□□□ -1.29
Col4a6B1AVK5 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col4a6B1AVK5 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms