Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm21054-201ENSMUST00000203981 380 ntBASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm45309-201ENSMUST00000211528 695 ntTSL 3 BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 AC127224.1-201ENSMUST00000218094 453 ntBASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 AC131795.1-201ENSMUST00000219632 426 ntBASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm18960-201ENSMUST00000222962 713 ntBASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 CT030182.4-201ENSMUST00000223647 645 ntBASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 AC164567.3-201ENSMUST00000217743 2869 ntBASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm42989-201ENSMUST00000200646 2306 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm44843-201ENSMUST00000208320 1396 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm7129-201ENSMUST00000117402 997 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm11865-201ENSMUST00000118093 859 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm15778-201ENSMUST00000118469 608 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm12601-201ENSMUST00000118994 846 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Mir6337-201ENSMUST00000184194 105 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm5261-201ENSMUST00000185860 713 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm6197-201ENSMUST00000192273 454 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm37017-201ENSMUST00000195266 747 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm8920-201ENSMUST00000196153 924 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm30708-201ENSMUST00000202183 312 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm45733-201ENSMUST00000212988 437 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 AC160338.3-201ENSMUST00000214836 384 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 AC151971.2-201ENSMUST00000217540 909 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 AL844586.1-201ENSMUST00000224297 1042 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm6054-201ENSMUST00000078052 378 ntBASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ighv1-11A0A0A6YWI9 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC4.8□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC4.8□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ighv1-11A0A0A6YWI9 AC122305.1-201ENSMUST00000214803 3921 ntBASIC4.8□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm8878-201ENSMUST00000173552 1725 ntBASIC4.8□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ighv1-11A0A0A6YWI9 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms