Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm22687-201ENSMUST00000158301 105 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm23822-201ENSMUST00000158739 128 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm25164-201ENSMUST00000158908 116 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm3611-201ENSMUST00000173687 877 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm43582-201ENSMUST00000196149 343 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm2566-201ENSMUST00000201267 431 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm45908-201ENSMUST00000212977 1177 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 AC121960.3-201ENSMUST00000227077 623 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm42969-201ENSMUST00000199858 3631 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 AC156025.2-201ENSMUST00000225907 1533 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Gm43211-201ENSMUST00000196901 1899 ntBASIC8.47□□□□□ -1.05
Trim11Q99PQ2 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Trim11Q99PQ2 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC8.46□□□□□ -1.05
Trim11Q99PQ2 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Trim11Q99PQ2 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Trim11Q99PQ2 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Trim11Q99PQ2 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Trim11Q99PQ2 Gm5583-201ENSMUST00000174328 1519 ntBASIC8.46□□□□□ -1.05
Trim11Q99PQ2 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Trim11Q99PQ2 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm15090-201ENSMUST00000118787 1196 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm14945-201ENSMUST00000119556 1118 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm14212-201ENSMUST00000122023 826 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm15089-201ENSMUST00000122332 1196 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm2951-201ENSMUST00000169447 490 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm26197-201ENSMUST00000175033 115 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm38164-201ENSMUST00000192810 330 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm43555-201ENSMUST00000196588 310 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm43487-201ENSMUST00000200331 1031 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm42472-201ENSMUST00000201626 859 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm18765-201ENSMUST00000203166 660 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm44919-201ENSMUST00000208587 1073 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm45382-201ENSMUST00000210607 151 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm17911-201ENSMUST00000210806 877 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 AC154382.1-201ENSMUST00000220958 1282 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm18619-201ENSMUST00000222722 1147 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 AC124729.1-202ENSMUST00000225587 938 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 AC140208.1-201ENSMUST00000226609 285 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 AC192088.2-201ENSMUST00000227590 411 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 AC093022.3-201ENSMUST00000226569 1926 ntBASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Trim11Q99PQ2 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms