Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Dcdc5-202ENSMUST00000122388 4957 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm6746-201ENSMUST00000108774 483 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm17184-201ENSMUST00000111864 462 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm14279-201ENSMUST00000117142 332 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm10243-201ENSMUST00000117571 333 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm11833-201ENSMUST00000118393 853 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm15616-201ENSMUST00000118662 375 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm11796-201ENSMUST00000120208 972 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm26528-201ENSMUST00000181965 283 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm18501-201ENSMUST00000185363 664 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm28958-201ENSMUST00000185864 703 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm9497-201ENSMUST00000199908 538 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm44722-201ENSMUST00000206473 436 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm4270-201ENSMUST00000209666 406 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm10247-201ENSMUST00000090395 333 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm17199-201ENSMUST00000097296 416 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 AC124183.1-201ENSMUST00000222367 2135 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cdk5rap3Q99LM2 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm8421-201ENSMUST00000119439 305 ntBASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm12297-201ENSMUST00000121380 979 ntBASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm7481-201ENSMUST00000182020 995 ntBASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm28573-201ENSMUST00000187821 380 ntBASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm28400-201ENSMUST00000191332 380 ntBASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cdk5rap3Q99LM2 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms