Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC098742.1-201ENSMUST00000227945 373 ntBASIC6.79□□□□□ -1.32
Clrn1Q8K445 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Clrn1Q8K445 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Clrn1Q8K445 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Clrn1Q8K445 Gm22504-201ENSMUST00000082963 139 ntBASIC6.79□□□□□ -1.32
Clrn1Q8K445 Gm26063-201ENSMUST00000083378 107 ntBASIC6.79□□□□□ -1.32
Clrn1Q8K445 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
Clrn1Q8K445 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Clrn1Q8K445 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Clrn1Q8K445 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Clrn1Q8K445 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Clrn1Q8K445 Gm13301-201ENSMUST00000121728 2446 ntBASIC6.79□□□□□ -1.32
Clrn1Q8K445 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Clrn1Q8K445 Gm28651-202ENSMUST00000227968 2693 ntBASIC6.79□□□□□ -1.32
Clrn1Q8K445 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Clrn1Q8K445 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Clrn1Q8K445 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC6.79□□□□□ -1.32
Clrn1Q8K445 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Clrn1Q8K445 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm15778-201ENSMUST00000118469 608 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm13940-201ENSMUST00000121023 301 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm23426-201ENSMUST00000122483 318 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm26000-201ENSMUST00000157991 107 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm21430-201ENSMUST00000182998 998 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm29492-201ENSMUST00000187124 457 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm28952-201ENSMUST00000189285 681 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm21742-201ENSMUST00000189352 548 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm37376-201ENSMUST00000192176 453 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm7341-201ENSMUST00000192183 926 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm42824-201ENSMUST00000199361 247 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm43967-201ENSMUST00000203787 301 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm44931-201ENSMUST00000206056 545 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm45247-201ENSMUST00000210757 309 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm18705-201ENSMUST00000215985 913 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gcnt2-204ENSMUST00000223570 335 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 AC147639.1-201ENSMUST00000224216 661 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Diaph3-204ENSMUST00000226254 682 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 AC154419.1-201ENSMUST00000227627 272 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.78□□□□□ -1.32
Clrn1Q8K445 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Clrn1Q8K445 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
Clrn1Q8K445 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.77□□□□□ -1.32
Clrn1Q8K445 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Clrn1Q8K445 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Clrn1Q8K445 Gm45360-201ENSMUST00000210698 1405 ntBASIC6.77□□□□□ -1.33
Clrn1Q8K445 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Clrn1Q8K445 AC159195.2-201ENSMUST00000223670 3757 ntBASIC6.77□□□□□ -1.33
Clrn1Q8K445 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Clrn1Q8K445 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Clrn1Q8K445 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms