Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm42580-201ENSMUST00000197223 753 ntBASIC7.9□□□□□ -1.14
Syne4Q8CII8 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC7.9□□□□□ -1.14
Syne4Q8CII8 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC7.9□□□□□ -1.14
Syne4Q8CII8 AC104906.1-201ENSMUST00000218122 913 ntBASIC7.9□□□□□ -1.14
Syne4Q8CII8 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.9□□□□□ -1.14
Syne4Q8CII8 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.9□□□□□ -1.14
Syne4Q8CII8 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.9□□□□□ -1.14
Syne4Q8CII8 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.9□□□□□ -1.14
Syne4Q8CII8 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Syne4Q8CII8 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.9□□□□□ -1.14
Syne4Q8CII8 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Syne4Q8CII8 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Syne4Q8CII8 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Syne4Q8CII8 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.15
Syne4Q8CII8 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Syne4Q8CII8 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Syne4Q8CII8 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Syne4Q8CII8 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Syne4Q8CII8 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
Syne4Q8CII8 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Syne4Q8CII8 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Syne4Q8CII8 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.9□□□□□ -1.15
Syne4Q8CII8 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm22370-201ENSMUST00000102422 83 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm4853-201ENSMUST00000119359 394 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm12307-201ENSMUST00000120581 590 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm3140-201ENSMUST00000163523 481 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm17044-201ENSMUST00000168549 828 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm21392-201ENSMUST00000182950 972 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Zfp572-202ENSMUST00000184208 1078 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm27295-201ENSMUST00000184264 153 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm28023-201ENSMUST00000184556 60 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm27825-201ENSMUST00000184586 60 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm37322-201ENSMUST00000193409 337 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm30708-201ENSMUST00000202183 312 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.89□□□□□ -1.15
Syne4Q8CII8 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Syne4Q8CII8 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm24473-201ENSMUST00000104483 131 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm13462-201ENSMUST00000121472 961 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm13642-201ENSMUST00000121697 381 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm25904-201ENSMUST00000158491 143 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm17137-202ENSMUST00000165729 957 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm20620-201ENSMUST00000177528 168 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Igkv4-73-201ENSMUST00000199760 358 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm34272-201ENSMUST00000208886 253 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 AC102139.1-201ENSMUST00000227000 251 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 Vmn1r41-205ENSMUST00000227630 827 ntBASIC7.88□□□□□ -1.15
Syne4Q8CII8 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Syne4Q8CII8 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms